RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ZACNQ401N2 412 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 JADE1Q6IE81 842 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 GLB1LQ6UWU2 654 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 GOLGA6L1Q8N7Z2 621 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 RNF169Q8NCN4 708 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 TOP1MTQ969P6 601 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 ZFP42Q96MM3 310 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 FUT8Q9BYC5 575 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 TMEM8AQ9HCN3 771 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 LRFN2Q9ULH4 789 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 COQ4Q9Y3A0 265 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 CITO14578 2027 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 RALGAPA2Q2PPJ7 1873 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 GTPBP10A4D1E9 387 aaKnown RBP13.24□□□□□ -0.29
SCARB1-204ENST00000535005 MAP2K7O14733 419 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 XPOTO43592 962 aaKnown RBP13.24□□□□□ -0.29
SCARB1-204ENST00000535005 ERLIN1O75477 346 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 NFICP08651 508 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 CYP3A5P20815 502 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 MLH1P40692 756 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 GCLMP48507 274 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 CLLU1OSQ5K130 101 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 KRT39Q6A163 491 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 SV2AQ7L0J3 742 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 OTOP2Q7RTS6 562 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 TMEM139Q8IV31 216 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 CEP112Q8N8E3 955 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 OR5B17Q8NGF7 314 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 KIF12Q96FN5 646 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 PPP1R10Q96QC0 940 aaKnown RBP13.24□□□□□ -0.29
SCARB1-204ENST00000535005 BAG1Q99933 345 aaPredicted RBP13.24□□□□□ -0.29
SCARB1-204ENST00000535005 NAA15Q9BXJ9 866 aaKnown RBP13.24□□□□□ -0.29
SCARB1-204ENST00000535005 TMEM117Q9H0C3 514 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 PCDH10Q9P2E7 1040 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 KANSL3Q9P2N6 904 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 UBQLN1Q9UMX0 589 aaKnown RBP13.24□□□□□ -0.29
SCARB1-204ENST00000535005 ANK1P16157 1881 aa13.24□□□□□ -0.29
SCARB1-204ENST00000535005 POLR3GO15318 223 aaPredicted RBP13.23□□□□□ -0.29
SCARB1-204ENST00000535005 MXI1P50539 228 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 NAB2Q15742 525 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 CBWD6Q4V339 395 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 NOMO2Q5JPE7 1267 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 CBWD3Q5JTY5 395 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 CBWD5Q5RIA9 395 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 RASIP1Q5U651 963 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 TRAPPC11Q7Z392 1133 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 ANKRD36BP1Q96IX9 119 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 RPS6KC1Q96S38 1066 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 SLC38A7Q9NVC3 462 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 MIOSQ9NXC5 875 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 CEP290O15078 2479 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 DGKIO75912 1065 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 TNNC2P02585 160 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 THP07101 528 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 TMEM191BP0C7N4 346 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 FGFR1P11362 822 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 ACTN2P35609 894 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 MAGEA10P43363 369 aaPredicted RBP13.23□□□□□ -0.29
SCARB1-204ENST00000535005 SCNN1GP51170 649 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 AFF1P51825 1210 aaKnown RBP13.23□□□□□ -0.29
SCARB1-204ENST00000535005 GNG11P61952 73 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 DEFB103AP81534 67 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 TFAMQ00059 246 aaKnown RBP13.23□□□□□ -0.29
SCARB1-204ENST00000535005 GRIK3Q13003 919 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 FKBP15Q5T1M5 1219 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 LMBRD2Q68DH5 695 aaPredicted RBP13.23□□□□□ -0.29
SCARB1-204ENST00000535005 LEKR1Q6ZMV7 388 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 BEST2Q8NFU1 509 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 CXorf38Q8TB03 319 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 PHOSPHO2Q8TCD6 241 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 URGCPQ8TCY9 931 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 CASD1Q96PB1 797 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 MTIF3Q9H2K0 278 aaKnown RBP13.23□□□□□ -0.29
SCARB1-204ENST00000535005 ACBD3Q9H3P7 528 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 RAB21Q9UL25 225 aa13.23□□□□□ -0.29
SCARB1-204ENST00000535005 A0A1W2PQC6 194 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 TEX33O43247 280 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 SASH3O75995 380 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
SCARB1-204ENST00000535005 MYL7Q01449 175 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 CETN1Q12798 172 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 EPC2Q52LR7 807 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 GLRA4Q5JXX5 417 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 TDRD10Q5VZ19 366 aaKnown RBP13.22□□□□□ -0.29
SCARB1-204ENST00000535005 HDXQ7Z353 690 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 ABI1Q8IZP0 508 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 C1orf127Q8N9H9 656 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 MSANTD4Q8NCY6 345 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 NEK11Q8NG66 645 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 ERGIC2Q96RQ1 377 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 PARD6BQ9BYG5 372 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 MTMR12Q9C0I1 747 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 DPP3Q9NY33 737 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 ITGA11Q9UKX5 1188 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 PLAGL2Q9UPG8 496 aa13.22□□□□□ -0.29
SCARB1-204ENST00000535005 VNN1O95497 513 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 LRPAP1P30533 357 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 PBX1P40424 430 aa13.21□□□□□ -0.29
SCARB1-204ENST00000535005 UBXN1Q04323 297 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms