RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 GUCA1BQ9UMX6 200 aa21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PCDHB2Q9Y5E7 798 aa21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 FANCGO15287 622 aa21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 HSPA8P11142 646 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 TBXAS1P24557 533 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 POLR2BP30876 1174 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 BMS1Q14692 1282 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CCDC122Q5T0U0 273 aa21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 SYT10Q6XYQ8 523 aa21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 VPS36Q86VN1 386 aa21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 DNAAF5Q86Y56 855 aa21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 NIF3L1Q9GZT8 377 aa21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CHST12Q9NRB3 414 aa21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 FAM105AQ9NUU6 356 aa21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 NOCTQ9UK39 431 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CAND2O75155 1236 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CALCAP01258 141 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ANXA13P27216 316 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ZBTB6Q15916 424 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CTU1Q7Z7A3 348 aaKnown RBP21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 NOP9Q86U38 636 aaKnown RBP21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 SLC30A5Q8TAD4 765 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PACSIN1Q9BY11 444 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 TUBGCP4Q9UGJ1 667 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 NENFQ9UMX5 172 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 DERAQ9Y315 318 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 MEIS3P2A8K0S8 358 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 MGEA5O60502 916 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 MBTPS1Q14703 1052 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ALKBH5Q6P6C2 394 aaKnown RBP21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 SCARA5Q6ZMJ2 495 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ZNF662Q6ZS27 426 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PALB2Q86YC2 1186 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 FAM126BQ8IXS8 530 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 C18orf25Q96B23 403 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 WDR24Q96S15 920 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 AGPAT1Q99943 283 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ITGA11Q9UKX5 1188 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 POLIQ9UNA4 740 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 AGAP1Q9UPQ3 857 aa21.81■■□□□ 1.08
TNFRSF1A-205ENST00000534885 KIF2AO00139 706 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CYP11B1P15538 503 aa21.8■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ASPAP45381 313 aa21.8■■□□□ 1.08
TNFRSF1A-205ENST00000534885 GNG11P61952 73 aa21.8■■□□□ 1.08
TNFRSF1A-205ENST00000534885 KIF5AQ12840 1032 aa21.8■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ZNF333Q96JL9 665 aa21.8■■□□□ 1.08
TNFRSF1A-205ENST00000534885 NXF1Q9UBU9 619 aaKnown RBP21.8■■□□□ 1.08
TNFRSF1A-205ENST00000534885 SCN1AP35498 2009 aa21.8■■□□□ 1.08
TNFRSF1A-205ENST00000534885 SMIM28A0A1B0GU29 152 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 KRT86O43790 486 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ZSCAN20P17040 1043 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 WDR72Q3MJ13 1102 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 XKR4Q5GH76 650 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 TAF3Q5VWG9 929 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 TMEM270Q6UE05 265 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 U2AF1L4Q8WU68 220 aaKnown RBP21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 SEPT11Q9NVA2 429 aaKnown RBP21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 DNAI1Q9UI46 699 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PCDHB4Q9Y5E5 795 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 FAM170AA1A519 330 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 WEE2P0C1S8 567 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CHRNB2P17787 502 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 NAB2Q15742 525 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 RPUSD2Q8IZ73 545 aaKnown RBP21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 UBR7Q8N806 425 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 TAF4BQ92750 862 aa21.79■■□□□ 1.08
TNFRSF1A-205ENST00000534885 KIF5CO60282 957 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CD58P19256 250 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 TNFAIP3P21580 790 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 MNX1P50219 401 aaPredicted RBP21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PDE6CP51160 858 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 LBX1P52954 281 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 DSC3Q14574 896 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ZNF667Q5HYK9 610 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 FBXO46Q6PJ61 603 aaPredicted RBP21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 USP38Q8NB14 1042 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 HPDLQ96IR7 371 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ZFP42Q96MM3 310 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 SQORQ9Y6N5 450 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 MACROD2A1Z1Q3 448 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PPEF2O14830 753 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PJA2O43164 708 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 MMEP08473 750 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 KCNE1P15382 129 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ATICP31939 592 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ATN1P54259 1190 aaPredicted RBP21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 RBP5P82980 135 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 BEST2Q8NFU1 509 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 DDX1Q92499 740 aaKnown RBP21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 LPPQ93052 612 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CRISPLD2Q9H0B8 497 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CNTN6Q9UQ52 1028 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PAXBP1Q9Y5B6 917 aa21.78■■□□□ 1.08
TNFRSF1A-205ENST00000534885 TMCO5BA8MYB1 307 aa21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CD4P01730 458 aa21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 RAP1GAPP47736 663 aa21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ZNF569Q5MCW4 686 aa21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 RBBP8NLQ8NC74 664 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CAGE1Q8TC20 777 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms