RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 ZP2Q05996 745 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 PSMD5Q16401 504 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 ADHFE1Q8IWW8 467 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 TMEM87AQ8NBN3 555 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 KIAA0895Q8NCT3 520 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 FAM213AQ9BRX8 229 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 CD320Q9NPF0 282 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 CGNQ9P2M7 1197 aaKnown RBP23.17■■□□□ 1.3
PKP3-211ENST00000534401 RHOBTB3O94955 611 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 PRR29P0C7W0 189 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 TMEM132DQ14C87 1099 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 KANK3Q6NY19 840 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 ARMCX5Q6P1M9 558 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 EFCAB13Q8IY85 973 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 GPD1LQ8N335 351 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 BEST2Q8NFU1 509 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 SAAL1Q96ER3 474 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 PLEKHA4Q9H4M7 779 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 AGPAT3Q9NRZ7 376 aa23.16■■□□□ 1.3
PKP3-211ENST00000534401 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.15■■□□□ 1.3
PKP3-211ENST00000534401 I3L4J1 428 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 TGM5O43548 720 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 GLUD1P00367 558 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 RPN1P04843 607 aaKnown RBP23.15■■□□□ 1.3
PKP3-211ENST00000534401 RPL17P18621 184 aaKnown RBP23.15■■□□□ 1.3
PKP3-211ENST00000534401 GUCY2FP51841 1108 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 RAB33AQ14088 237 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 KCNB1Q14721 858 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 KNOP1Q1ED39 458 aaKnown RBP23.15■■□□□ 1.3
PKP3-211ENST00000534401 RSPO2Q6UXX9 243 aaPredicted RBP23.15■■□□□ 1.3
PKP3-211ENST00000534401 ANKS3Q6ZW76 656 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 CEP57Q86XR8 500 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 CXorf38Q8TB03 319 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 PCIF1Q9H4Z3 704 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 KIAA1586Q9HCI6 787 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 EXOC1Q9NV70 894 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 HSPBP1Q9NZL4 362 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 CHMP5Q9NZZ3 219 aa23.15■■□□□ 1.3
PKP3-211ENST00000534401 TNFRSF10AO00220 468 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 PPEF2O14830 753 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 ADAM12O43184 909 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 CBX2Q14781 532 aaPredicted RBP23.14■■□□□ 1.29
PKP3-211ENST00000534401 C9orf57Q5W0N0 161 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 SLC8B1Q6J4K2 584 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 CYP26C1Q6V0L0 522 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 FAM212AQ96EL1 285 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 TIGD1Q96MW7 591 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 SFXN1Q9H9B4 322 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 DPP7Q9UHL4 492 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 PCDHB8Q9UN66 801 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 NUB1Q9Y5A7 615 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 C2orf16Q68DN1 1984 aa23.14■■□□□ 1.29
PKP3-211ENST00000534401 GOLGA8IPA6NC78 632 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 GOLGA8JA6NMD2 632 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 LILRA4P59901 499 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 FAM160A1Q05DH4 1040 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 VARS2Q5ST30 1063 aaKnown RBP23.13■■□□□ 1.29
PKP3-211ENST00000534401 C15orf39Q6ZRI6 1047 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 GPR149Q86SP6 731 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 ELOA2Q8IYF1 753 aaPredicted RBP23.13■■□□□ 1.29
PKP3-211ENST00000534401 C12orf76Q8N812 135 aaPredicted RBP23.13■■□□□ 1.29
PKP3-211ENST00000534401 SPATA20Q8TB22 786 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 PHF7Q9BWX1 381 aaPredicted RBP23.13■■□□□ 1.29
PKP3-211ENST00000534401 KCTD10Q9H3F6 313 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 MAN1C1Q9NR34 630 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 DMAC2Q9NW81 257 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 DPP3Q9NY33 737 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 RBAKQ9NYW8 714 aaPredicted RBP23.13■■□□□ 1.29
PKP3-211ENST00000534401 FBXW11Q9UKB1 542 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 DENND4AQ7Z401 1863 aa23.13■■□□□ 1.29
PKP3-211ENST00000534401 ZNF233A6NK53 670 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 LOC730098B7Z3J9 87 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 OAZ2O95190 189 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 ANP32AP39687 249 aaKnown RBP23.12■■□□□ 1.29
PKP3-211ENST00000534401 MTHFRP42898 656 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 PALB2Q86YC2 1186 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 SLC9A9Q8IVB4 645 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 NELFCDQ8IXH7 590 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 GJD3Q8N144 294 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 FEZF2Q8TBJ5 459 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 BORCS6Q96GS4 357 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 NECTIN4Q96NY8 510 aa23.12■■□□□ 1.29
PKP3-211ENST00000534401 GOLGA6L4A6NEF3 574 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 SPTLC1O15269 473 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 MCM4P33991 863 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 OR1D2P34982 312 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 RARS2Q5T160 578 aaKnown RBP23.11■■□□□ 1.29
PKP3-211ENST00000534401 CES5AQ6NT32 575 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 RTL10Q7L3V2 364 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 HS2ST1Q7LGA3 356 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 CBWD2Q8IUF1 395 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 KREMEN2Q8NCW0 462 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 APPL2Q8NEU8 664 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 GOLGA5Q8TBA6 731 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 POP1Q99575 1024 aaKnown RBP23.11■■□□□ 1.29
PKP3-211ENST00000534401 PDE11AQ9HCR9 933 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 ZDHHC7Q9NXF8 308 aa23.11■■□□□ 1.29
PKP3-211ENST00000534401 DOCK6Q96HP0 2047 aa23.1■■□□□ 1.29
PKP3-211ENST00000534401 H7C4K7 107 aa23.1■■□□□ 1.29
PKP3-211ENST00000534401 PDXKO00764 312 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms