RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CFHP08603 1231 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 CLCN5P51795 746 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 MRPL58Q14197 206 aaKnown RBP16.79■□□□□ 0.28
CPSF1-211ENST00000533492 STK38Q15208 465 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 ZBTB6Q15916 424 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 PABPC1LQ4VXU2 614 aaKnown RBP16.79■□□□□ 0.28
CPSF1-211ENST00000533492 ZBTB41Q5SVQ8 909 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 ADALQ6DHV7 355 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 DSTYKQ6XUX3 929 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 SFR1Q86XK3 245 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 SIX5Q8N196 739 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 FIZ1Q96SL8 496 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 ST6GALNAC4Q9H4F1 302 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 MRPL44Q9H9J2 332 aaKnown RBP16.79■□□□□ 0.28
CPSF1-211ENST00000533492 CYP4F11Q9HBI6 524 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 HCFC1R1Q9NWW0 138 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 WNT16Q9UBV4 365 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 PCDHB8Q9UN66 801 aa16.79■□□□□ 0.28
CPSF1-211ENST00000533492 PDCD11Q14690 1871 aaKnown RBP16.78■□□□□ 0.28
CPSF1-211ENST00000533492 KMT2EQ8IZD2 1858 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 MYMKA6NI61 221 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 ANKRD63C9JTQ0 380 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 ANHXE9PGG2 379 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 TBC1D4O60343 1298 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 HSP90AA1P07900 732 aaKnown RBP16.78■□□□□ 0.28
CPSF1-211ENST00000533492 SRFP11831 508 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 ATF2P15336 505 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 GAP43P17677 238 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 RFX1P22670 979 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 STAT6P42226 847 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 ACOT2P49753 483 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 TCF15Q12870 199 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 HTR4Q13639 388 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 TPGS2Q68CL5 300 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 SLC39A4Q6P5W5 647 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 ZNF720Q7Z2F6 126 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 USP37Q86T82 979 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 TMEM105Q8N8V8 129 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 ST13P5Q8NFI4 369 aaPredicted RBP16.78■□□□□ 0.28
CPSF1-211ENST00000533492 BEST2Q8NFU1 509 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 ITFG1Q8TB96 612 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 FGF13Q92913 245 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 DNMT3BQ9UBC3 853 aaKnown RBP16.78■□□□□ 0.28
CPSF1-211ENST00000533492 SEL1LQ9UBV2 794 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 CPSF3Q9UKF6 684 aaKnown RBP16.78■□□□□ 0.28
CPSF1-211ENST00000533492 AGO2Q9UKV8 859 aaKnown RBP16.78■□□□□ 0.28
CPSF1-211ENST00000533492 KCNH3Q9ULD8 1083 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 MRPS23Q9Y3D9 190 aaKnown RBP16.78■□□□□ 0.28
CPSF1-211ENST00000533492 NUMBLQ9Y6R0 609 aa16.78■□□□□ 0.28
CPSF1-211ENST00000533492 FAM189A1O60320 539 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 ADRB2P07550 413 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 IDEP14735 1019 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 CPB1P15086 417 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 PTPN2P17706 415 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 MRE11P49959 708 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 GUCY2FP51841 1108 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 YWHAHQ04917 246 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-211ENST00000533492 POSTNQ15063 836 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 SPATA1Q5VX52 437 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 JADE1Q6IE81 842 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 MTSS1LQ765P7 747 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 TCEAL8Q8IYN2 117 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 TMEM130Q8N3G9 435 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 ATOH1Q92858 354 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-211ENST00000533492 SNX21Q969T3 373 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 HVCN1Q96D96 273 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 ZNF396Q96N95 335 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-211ENST00000533492 TBC1D7Q9P0N9 293 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 EXOC7Q9UPT5 735 aa16.77■□□□□ 0.28
CPSF1-211ENST00000533492 TIMM13Q9Y5L4 95 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-211ENST00000533492 MORC2Q9Y6X9 1032 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-211ENST00000533492 ARHGEF37A1IGU5 675 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 M0QZQ0 153 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 TULP1O00294 542 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-211ENST00000533492 GALR2O43603 387 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-211ENST00000533492 RHOP08100 348 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 NASPP49321 788 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-211ENST00000533492 ADCY1Q08828 1119 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 TMEM132DQ14C87 1099 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 PARM1Q6UWI2 310 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 HSCBQ8IWL3 235 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 ELMOD1Q8N336 334 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 PDILTQ8N807 584 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 POMGNT1Q8WZA1 660 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 ACCSQ96QU6 501 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 RTP3Q9BQQ7 232 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 OXCT2Q9BYC2 517 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-211ENST00000533492 ASB7Q9H672 318 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 TFIP11Q9UBB9 837 aaKnown RBP16.76■□□□□ 0.27
CPSF1-211ENST00000533492 AFF4Q9UHB7 1163 aaKnown RBP16.76■□□□□ 0.27
CPSF1-211ENST00000533492 CA14Q9ULX7 337 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 MAFFQ9ULX9 164 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 PCDHB13Q9Y5F0 798 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 PIEZO1Q92508 2521 aa16.76■□□□□ 0.27
CPSF1-211ENST00000533492 TISP43B9A030 160 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 H0Y858 1186 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 SPTLC2O15270 562 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 OAZ2O95190 189 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 GCNT3O95395 438 aa16.75■□□□□ 0.27
CPSF1-211ENST00000533492 SEC24AO95486 1093 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms