RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 PTPRHQ9HD43 1115 aa11.14□□□□□ -0.63
CHMP4A-206ENST00000533011 KLK14Q9P0G3 267 aa11.14□□□□□ -0.63
CHMP4A-206ENST00000533011 MRPS17Q9Y2R5 130 aaKnown RBP11.14□□□□□ -0.63
CHMP4A-206ENST00000533011 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.14□□□□□ -0.63
CHMP4A-206ENST00000533011 CNOT1A5YKK6 2376 aaKnown RBP11.14□□□□□ -0.63
CHMP4A-206ENST00000533011 ZFYVE26Q68DK2 2539 aa11.14□□□□□ -0.63
CHMP4A-206ENST00000533011 TRAK2O60296 914 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 RECQL4O94761 1208 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 ABCD1P33897 745 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 STAT6P42226 847 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 DNM1Q05193 864 aaKnown RBP11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 HTR4Q13639 388 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 ZNF568Q3ZCX4 644 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 SLC44A4Q53GD3 710 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 LRSAM1Q6UWE0 723 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 ZPBP2Q6X784 338 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 PRR23CQ6ZRP0 262 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 TMEM173Q86WV6 379 aaPredicted RBP11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 COLGALT2Q8IYK4 626 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 PDILTQ8N807 584 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 AUTS2Q8WXX7 1259 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 MYADMQ96S97 322 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 CDT1Q9H211 546 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 PLEKHA4Q9H4M7 779 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 MRPL17Q9NRX2 175 aaKnown RBP11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 SEMA4GQ9NTN9 838 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 ZMIZ1Q9ULJ6 1067 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 GDAQ9Y2T3 454 aa11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 SETXQ7Z333 2677 aaKnown RBP11.13□□□□□ -0.63
CHMP4A-206ENST00000533011 A0A087X0B3 334 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 MYMKA6NI61 221 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 TOM1L1O75674 476 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 THP07101 528 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 ADH1AP07327 375 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 CNPP09543 421 aaKnown RBP11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 MCF2P10911 925 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 PROZP22891 400 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 CNR2P34972 360 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 GRM5P41594 1212 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 OR1G1P47890 313 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 ME1P48163 572 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 YARSP54577 528 aaKnown RBP11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 GPC5P78333 572 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 SNW1Q13573 536 aaKnown RBP11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 UBXN2BQ14CS0 331 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 MLF2Q15773 248 aaPredicted RBP11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 AXDND1Q5T1B0 1012 aaPredicted RBP11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 SHC4Q6S5L8 630 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 MPZL3Q6UWV2 235 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 DYMQ7RTS9 669 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 BCL7CQ8WUZ0 217 aaPredicted RBP11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 DDX12PQ92771 950 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 CCDC94Q9BW85 323 aaPredicted RBP11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 COLEC11Q9BWP8 271 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 PIDD1Q9HB75 910 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 PRMT8Q9NR22 394 aaPredicted RBP11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 TOPORSQ9NS56 1045 aaPredicted RBP11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 RCOR1Q9UKL0 485 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 TBX20Q9UMR3 447 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 PRG3Q9Y2Y8 225 aaPredicted RBP11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 ZDHHC9Q9Y397 364 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 ATP6V1DQ9Y5K8 247 aa11.12□□□□□ -0.63
CHMP4A-206ENST00000533011 K7ENM7 598 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 ABLIM1O14639 778 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 PTGESO14684 152 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 CLDN3O15551 220 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 LILRB3O75022 631 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 LRRN2O75325 713 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 GAP43P17677 238 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 GTF2BQ00403 316 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 TUSC3Q13454 348 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 UNQ6494/PRO21346Q6UXR6 183 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 MTSS1LQ765P7 747 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 CEP120Q8N960 986 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 SMG7Q92540 1137 aaKnown RBP11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 DNAJC19Q96DA6 116 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 BICD1Q96G01 975 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 ZBTB45Q96K62 511 aaPredicted RBP11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 ACAP3Q96P50 834 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 LRRC27Q9C0I9 530 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 CUEDC2Q9H467 287 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 ST6GALNAC4Q9H4F1 302 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 LTB4R2Q9NPC1 389 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 MAN1C1Q9NR34 630 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 MARCH5Q9NX47 278 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 ZDHHC7Q9NXF8 308 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 ANKFY1Q9P2R3 1169 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 SEL1LQ9UBV2 794 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 PCDHA7Q9UN72 937 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 NUMBLQ9Y6R0 609 aa11.11□□□□□ -0.63
CHMP4A-206ENST00000533011 TM4SF5O14894 197 aa11.1□□□□□ -0.63
CHMP4A-206ENST00000533011 HNRNPDLO14979 420 aaKnown RBP11.1□□□□□ -0.63
CHMP4A-206ENST00000533011 GLUD1P00367 558 aa11.1□□□□□ -0.63
CHMP4A-206ENST00000533011 SOD2P04179 222 aa11.1□□□□□ -0.63
CHMP4A-206ENST00000533011 NMT1P30419 496 aaKnown RBP11.1□□□□□ -0.63
CHMP4A-206ENST00000533011 MATR3P43243 847 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHMP4A-206ENST00000533011 LIG4P49917 911 aa11.1□□□□□ -0.63
CHMP4A-206ENST00000533011 OSTNP61366 133 aa11.1□□□□□ -0.63
CHMP4A-206ENST00000533011 KRT85P78386 507 aa11.1□□□□□ -0.63
CHMP4A-206ENST00000533011 AMPD3Q01432 767 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms