RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ANO9A1A5B4 782 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 SYCE3A1L190 88 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 PIRO00625 290 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 SOD2P04179 222 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 CCDC192P0DO97 292 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 PAX3P23760 479 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 POLR2BP30876 1174 aaKnown RBP24.05■■□□□ 1.44
LRRK1-208ENST00000532029 BRCC3P46736 316 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 DLG4P78352 724 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 RBP5P82980 135 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 TRAPPC11Q7Z392 1133 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 ZNF560Q96MR9 790 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 GUCD1Q96NT3 240 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 TCF25Q9BQ70 676 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 VN1R3Q9BXE9 311 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 GPR62Q9BZJ7 368 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 AGAP1Q9UPQ3 857 aa24.05■■□□□ 1.44
LRRK1-208ENST00000532029 PPEF2O14830 753 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 IKBKBO14920 756 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 STX10O60499 249 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 PHACTR2O75167 634 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 TRIM49P0CI25 452 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 TRIM49CP0CI26 452 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 CA8P35219 290 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 PNPLA4P41247 253 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 TAF6P49848 677 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 ERVFC1P60507 584 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 CLDN10P78369 228 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 BIRC3Q13489 604 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 ADGRE1Q14246 886 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 USP41Q3LFD5 358 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 FAM171A1Q5VUB5 890 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 TCERG1LQ5VWI1 586 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 PDE12Q6L8Q7 609 aaKnown RBP24.04■■□□□ 1.44
LRRK1-208ENST00000532029 KIAA1841Q6NSI8 718 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 CD300LGQ6UXG3 332 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 C11orf57Q6ZUT1 292 aaPredicted RBP24.04■■□□□ 1.44
LRRK1-208ENST00000532029 FRMD5Q7Z6J6 570 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 BORCS6Q96GS4 357 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 MED15Q96RN5 788 aa24.04■■□□□ 1.44
LRRK1-208ENST00000532029 URODP06132 367 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 FOSL2P15408 326 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 IGFBP6P24592 240 aaPredicted RBP24.03■■□□□ 1.44
LRRK1-208ENST00000532029 GLUD2P49448 558 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 TRPC3Q13507 836 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 CAMK1Q14012 370 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 SMC1AQ14683 1233 aaKnown RBP24.03■■□□□ 1.44
LRRK1-208ENST00000532029 TIGD5Q53EQ6 642 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 DCAF17Q5H9S7 520 aaPredicted RBP24.03■■□□□ 1.44
LRRK1-208ENST00000532029 PLPP4Q5VZY2 271 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 DSTYKQ6XUX3 929 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 ZNF516Q92618 1163 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 NAT10Q9H0A0 1025 aaKnown RBP24.03■■□□□ 1.44
LRRK1-208ENST00000532029 ZBP1Q9H171 429 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 DNAJC25Q9H1X3 360 aa24.03■■□□□ 1.44
LRRK1-208ENST00000532029 NGRNQ9NPE2 291 aaKnown RBP24.03■■□□□ 1.44
LRRK1-208ENST00000532029 LAMA2P24043 3122 aaKnown RBP24.03■■□□□ 1.44
LRRK1-208ENST00000532029 I3L4J1 428 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 FSCN2O14926 492 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 EFEMP2O95967 443 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 CTSAP10619 480 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 POU3F3P20264 500 aaPredicted RBP24.02■■□□□ 1.44
LRRK1-208ENST00000532029 IRS1P35568 1242 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 ZSCAN23Q3MJ62 389 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 SV2CQ496J9 727 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.02■■□□□ 1.44
LRRK1-208ENST00000532029 TAS1R1Q7RTX1 841 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 CEP57Q86XR8 500 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 RNF168Q8IYW5 571 aaPredicted RBP24.02■■□□□ 1.44
LRRK1-208ENST00000532029 LRRC52Q8N7C0 313 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 MMRN2Q9H8L6 949 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 SIX4Q9UIU6 781 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 SSX2IPQ9Y2D8 614 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 MTCH2Q9Y6C9 303 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 CHD9Q3L8U1 2897 aa24.02■■□□□ 1.44
LRRK1-208ENST00000532029 CXCL14O95715 111 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 GTF2H1P32780 548 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 GCLMP48507 274 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 LILRA4P59901 499 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 MYO1EQ12965 1108 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 ANO6Q4KMQ2 910 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 C1orf220Q5T0J3 134 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 CREBRFQ8IUR6 639 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 FAM114A1Q8IWE2 563 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 ENOX1Q8TC92 643 aaKnown RBP24.01■■□□□ 1.43
LRRK1-208ENST00000532029 PPP2R3CQ969Q6 453 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 SUSD3Q96L08 255 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 TTPALQ9BTX7 342 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 THAP9Q9H5L6 903 aa24.01■■□□□ 1.43
LRRK1-208ENST00000532029 MRPL17Q9NRX2 175 aaKnown RBP24.01■■□□□ 1.43
LRRK1-208ENST00000532029 ARHGEF37A1IGU5 675 aa24■■□□□ 1.43
LRRK1-208ENST00000532029 CLSTN1O94985 981 aa24■■□□□ 1.43
LRRK1-208ENST00000532029 C4BPAP04003 597 aaKnown RBP24■■□□□ 1.43
LRRK1-208ENST00000532029 AARSP49588 968 aaKnown RBP eCLIP24■■□□□ 1.43
LRRK1-208ENST00000532029 MCCD1P59942 119 aaPredicted RBP24■■□□□ 1.43
LRRK1-208ENST00000532029 DSG1Q02413 1049 aa24■■□□□ 1.43
LRRK1-208ENST00000532029 PPP3CAQ08209 521 aa24■■□□□ 1.43
LRRK1-208ENST00000532029 TDRD10Q5VZ19 366 aaKnown RBP24■■□□□ 1.43
LRRK1-208ENST00000532029 SV2AQ7L0J3 742 aa24■■□□□ 1.43
LRRK1-208ENST00000532029 CXorf38Q8TB03 319 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms