RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	LNX1	Q8TBB1	728 aa	Predicted RBP	27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	KCTD10	Q9H3F6	313 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	RMND1	Q9NWS8	449 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	TTC28	Q96AY4	2481 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	ANK1	P16157	1881 aa		27.95	■■■□□ 2.07
PICALM-215	ENST00000531558	KIF20A	O95235	890 aa		27.95	■■■□□ 2.06
PICALM-215	ENST00000531558	EPCAM	P16422	314 aa		27.95	■■■□□ 2.06
PICALM-215	ENST00000531558	TKT	P29401	623 aa	Known RBP	27.95	■■■□□ 2.06
PICALM-215	ENST00000531558	C9orf57	Q5W0N0	161 aa		27.95	■■■□□ 2.06
PICALM-215	ENST00000531558	SMRP1	Q8NCR6	262 aa		27.95	■■■□□ 2.06
PICALM-215	ENST00000531558	SUSD3	Q96L08	255 aa		27.95	■■■□□ 2.06
PICALM-215	ENST00000531558	PDE11A	Q9HCR9	933 aa		27.95	■■■□□ 2.06
PICALM-215	ENST00000531558	PPEF2	O14830	753 aa		27.94	■■■□□ 2.06
PICALM-215	ENST00000531558	SYN3	O14994	580 aa		27.94	■■■□□ 2.06
PICALM-215	ENST00000531558	SMC2	O95347	1197 aa		27.94	■■■□□ 2.06
PICALM-215	ENST00000531558	RPL17	P18621	184 aa	Known RBP	27.94	■■■□□ 2.06
PICALM-215	ENST00000531558	AARS	P49588	968 aa	Known RBP eCLIP	27.94	■■■□□ 2.06	7e-7	■■□□□ 12.9
PICALM-215	ENST00000531558	SMAD4	Q13485	552 aa	Known RBP	27.94	■■■□□ 2.06
PICALM-215	ENST00000531558	SNRNP35	Q16560	246 aa	Known RBP	27.94	■■■□□ 2.06
PICALM-215	ENST00000531558	CLEC17A	Q6ZS10	378 aa		27.94	■■■□□ 2.06
PICALM-215	ENST00000531558	SPATA20	Q8TB22	786 aa		27.94	■■■□□ 2.06
PICALM-215	ENST00000531558	GSDMA	Q96QA5	445 aa		27.94	■■■□□ 2.06
PICALM-215	ENST00000531558	DPP3	Q9NY33	737 aa		27.94	■■■□□ 2.06
PICALM-215	ENST00000531558	ANO9	A1A5B4	782 aa		27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	GRXCR2	A6NFK2	248 aa		27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	TULP1	O00294	542 aa	Predicted RBP	27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	PDXK	O00764	312 aa		27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	HOXB8	P17481	243 aa	Predicted RBP	27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	TFAM	Q00059	246 aa	Known RBP	27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	GUF1	Q8N442	669 aa	Known RBP	27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	ERCC4	Q92889	916 aa	Predicted RBP	27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	SMARCE1	Q969G3	411 aa		27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	DZANK1	Q9NVP4	752 aa		27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	MTRR	Q9UBK8	725 aa		27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	PCDHA5	Q9Y5H7	936 aa		27.93	■■■□□ 2.06
PICALM-215	ENST00000531558	VWA8	A3KMH1	1905 aa		27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	PIR	O00625	290 aa		27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	MBTPS2	O43462	519 aa		27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	PRPF40A	O75400	957 aa	Known RBP	27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	GLUD1	P00367	558 aa		27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	SYCE2	Q6PIF2	218 aa		27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	ANKS3	Q6ZW76	656 aa		27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	TMEM174	Q8WUU8	243 aa		27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	CLSTN3	Q9BQT9	956 aa		27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	MAPK8IP1	Q9UQF2	711 aa		27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	FAM50B	Q9Y247	325 aa		27.92	■■■□□ 2.06
PICALM-215	ENST00000531558	EXOC3	O60645	756 aa		27.91	■■■□□ 2.06
PICALM-215	ENST00000531558	IL9	P15248	144 aa		27.91	■■■□□ 2.06
PICALM-215	ENST00000531558	SURF1	Q15526	300 aa		27.91	■■■□□ 2.06
PICALM-215	ENST00000531558	VARS2	Q5ST30	1063 aa	Known RBP	27.91	■■■□□ 2.06
PICALM-215	ENST00000531558	SLC9A9	Q8IVB4	645 aa		27.91	■■■□□ 2.06
PICALM-215	ENST00000531558	GLYCTK	Q8IVS8	523 aa		27.91	■■■□□ 2.06
PICALM-215	ENST00000531558	RDH13	Q8NBN7	331 aa		27.91	■■■□□ 2.06
PICALM-215	ENST00000531558	CACTIN	Q8WUQ7	758 aa	Known RBP	27.91	■■■□□ 2.06
PICALM-215	ENST00000531558	PCDHB8	Q9UN66	801 aa		27.91	■■■□□ 2.06
PICALM-215	ENST00000531558	BACE2	Q9Y5Z0	518 aa		27.91	■■■□□ 2.06
PICALM-215	ENST00000531558		M0QZQ0	153 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	C1R	P00736	705 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	PAX3	P23760	479 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	LILRA4	P59901	499 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	CYP24A1	Q07973	514 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	SMYD4	Q8IYR2	804 aa	Predicted RBP	27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	APPL2	Q8NEU8	664 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	ADAMTS19	Q8TE59	1207 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	FAM84A	Q96KN4	292 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	S1PR5	Q9H228	398 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	DMAC2	Q9NW81	257 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	TRAF3IP3	Q9Y228	551 aa		27.9	■■■□□ 2.06
PICALM-215	ENST00000531558	CUL9	Q8IWT3	2517 aa		27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	ADAM12	O43184	909 aa		27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	CALU	O43852	315 aa	Predicted RBP	27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	NR3C1	P04150	777 aa		27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	PSMD6	Q15008	389 aa		27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	ZNF658	Q5TYW1	1059 aa	Predicted RBP	27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	PALB2	Q86YC2	1186 aa		27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	C1orf127	Q8N9H9	656 aa		27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	APOL5	Q9BWW9	433 aa		27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	MTMR12	Q9C0I1	747 aa		27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	MAN1C1	Q9NR34	630 aa		27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	INTS13	Q9NVM9	706 aa		27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	USP15	Q9Y4E8	981 aa	Predicted RBP	27.89	■■■□□ 2.06
PICALM-215	ENST00000531558	PTPRJ	Q12913	1337 aa		27.89	■■■□□ 2.05
PICALM-215	ENST00000531558	SPTLC1	O15269	473 aa		27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	TGM5	O43548	720 aa		27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	TMEM191B	P0C7N4	346 aa		27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	MRPL58	Q14197	206 aa	Known RBP	27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	MYBPC2	Q14324	1141 aa		27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	SMAD2	Q15796	467 aa	Known RBP	27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	LMBRD2	Q68DH5	695 aa	Predicted RBP	27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	RSPO2	Q6UXX9	243 aa	Predicted RBP	27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	DSTYK	Q6XUX3	929 aa		27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	WDR49	Q8IV35	697 aa		27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	ITGA11	Q9UKX5	1188 aa		27.88	■■■□□ 2.05
PICALM-215	ENST00000531558	ITGB3	P05106	788 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	POLR2B	P30876	1174 aa	Known RBP	27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	TAF6	P49848	677 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	COBLL1	Q53SF7	1204 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	LILRA6	Q6PI73	481 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	ELMSAN1	Q6PJG2	1045 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	C12orf76	Q8N812	135 aa	Predicted RBP	27.87	■■■□□ 2.05

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