RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 TNPO3Q9Y5L0 923 aaKnown RBP6.46□□□□□ -1.38
CASP4-210ENST00000531546 BRCA2P51587 3418 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 PCDH11XQ9BZA7 1347 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 PCDH11YQ9BZA8 1340 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 A0A0A6YYJ9 748 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
CASP4-210ENST00000531546 M0R2C6 588 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 DVL2O14641 736 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 TYRP1P17643 537 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 EPHX2P34913 555 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 DDR1Q08345 913 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 ADCY2Q08462 1091 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 SF3A1Q15459 793 aaKnown RBP6.45□□□□□ -1.38
CASP4-210ENST00000531546 DOK3Q7L591 496 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 HDGFL2Q7Z4V5 671 aaPredicted RBP6.45□□□□□ -1.38
CASP4-210ENST00000531546 FGD2Q7Z6J4 655 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 PHYKPLQ8IUZ5 450 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 UNC5BQ8IZJ1 945 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 C7orf31Q8N865 590 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 KIAA1958Q8N8K9 716 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 CAVIN3Q969G5 261 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 ZNF622Q969S3 477 aaKnown RBP eCLIP6.45□□□□□ -1.38
CASP4-210ENST00000531546 HIST1H2AHQ96KK5 128 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 HIST1H2AJQ99878 128 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 ENKD1Q9H0I2 346 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 MTG2Q9H4K7 406 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 SRP68Q9UHB9 627 aaKnown RBP6.45□□□□□ -1.38
CASP4-210ENST00000531546 HDAC5Q9UQL6 1122 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 RNF123Q5XPI4 1314 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 CACNA1SQ13698 1873 aa6.45□□□□□ -1.38
CASP4-210ENST00000531546 KTN1Q86UP2 1357 aaKnown RBP6.44□□□□□ -1.38
CASP4-210ENST00000531546 OPHN1O60890 802 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 APOBEC3AP31941 199 aaPredicted RBP6.44□□□□□ -1.38
CASP4-210ENST00000531546 TIGD7Q6NT04 549 aaPredicted RBP6.44□□□□□ -1.38
CASP4-210ENST00000531546 FBXO42Q6P3S6 717 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 KANSL1Q7Z3B3 1105 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 C2CD5Q86YS7 1000 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 PLXDC1Q8IUK5 500 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 ZSWIM2Q8NEG5 633 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 PIGBQ92521 554 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 CPEB1Q9BZB8 566 aaKnown RBP6.44□□□□□ -1.38
CASP4-210ENST00000531546 TAOK3Q9H2K8 898 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 SLC12A5Q9H2X9 1139 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 AKIP1Q9NQ31 210 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 SYBUQ9NX95 663 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 TERF2IPQ9NYB0 399 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 TMOD3Q9NYL9 352 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 CLCA2Q9UQC9 943 aa6.44□□□□□ -1.38
CASP4-210ENST00000531546 MAP2P11137 1827 aaKnown RBP6.43□□□□□ -1.38
CASP4-210ENST00000531546 VCANP13611 3396 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 ST20-MTHFSA0A0A6YYL1 179 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 DIRC3C9JPN6 131 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 ALDH1A2O94788 518 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 HKR1P10072 659 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 AMPHP49418 695 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 BLOC1S1P78537 153 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 FAM189BP81408 668 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 PRR16Q569H4 304 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 EPHA10Q5JZY3 1008 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 ZCCHC8Q6NZY4 707 aaKnown RBP6.43□□□□□ -1.38
CASP4-210ENST00000531546 CTU1Q7Z7A3 348 aaKnown RBP6.43□□□□□ -1.38
CASP4-210ENST00000531546 PNMA8AQ86V59 439 aaPredicted RBP6.43□□□□□ -1.38
CASP4-210ENST00000531546 CMTR2Q8IYT2 770 aaKnown RBP6.43□□□□□ -1.38
CASP4-210ENST00000531546 LILRA3Q8N6C8 439 aaPredicted RBP6.43□□□□□ -1.38
CASP4-210ENST00000531546 OR5M3Q8NGP4 307 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 LINC00476Q8WZB0 136 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 IL17RAQ96F46 866 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 NOL10Q9BSC4 688 aaKnown RBP6.43□□□□□ -1.38
CASP4-210ENST00000531546 PRDM13Q9H4Q3 707 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 RSAD1Q9HA92 442 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 TRIM39Q9HCM9 518 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 CABP5Q9NP86 173 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 ING3Q9NXR8 418 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 ASAP1Q9ULH1 1129 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 DLEC1Q9Y238 1755 aa6.43□□□□□ -1.38
CASP4-210ENST00000531546 CEP290O15078 2479 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 AFDNP55196 1824 aaKnown RBP6.42□□□□□ -1.38
CASP4-210ENST00000531546 H0YIN7 160 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 POLRMTO00411 1230 aaKnown RBP6.42□□□□□ -1.38
CASP4-210ENST00000531546 NCR1O76036 304 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 CELF2O95319 508 aaKnown RBP6.42□□□□□ -1.38
CASP4-210ENST00000531546 C1RP00736 705 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 GAAP10253 952 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 ITGB6P18564 788 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 BMPR1AP36894 532 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 ELLP55199 621 aaPredicted RBP6.42□□□□□ -1.38
CASP4-210ENST00000531546 C2orf27AQ580R0 203 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 PAPD7Q5XG87 772 aaKnown RBP6.42□□□□□ -1.38
CASP4-210ENST00000531546 KIAA1841Q6NSI8 718 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 TESK2Q96S53 571 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 SAMD15Q9P1V8 674 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 HDAC9Q9UKV0 1011 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 FER1L6Q2WGJ9 1857 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 ZNF541Q9H0D2 1346 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 AKAP11Q9UKA4 1901 aa6.42□□□□□ -1.38
CASP4-210ENST00000531546 PTPDC1A2A3K4 754 aa6.41□□□□□ -1.38
CASP4-210ENST00000531546 GLRX3O76003 335 aaKnown RBP6.41□□□□□ -1.38
CASP4-210ENST00000531546 PTX3P26022 381 aaPredicted RBP6.41□□□□□ -1.38
CASP4-210ENST00000531546 IGFALSP35858 605 aa6.41□□□□□ -1.38
CASP4-210ENST00000531546 MRPL49Q13405 166 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms