RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SHISA7A6NL88 538 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 TMEM189-UBE2V1I3L0A0 370 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 WNT7AO00755 349 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 DPYSL4O14531 572 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 PFKFB2O60825 505 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 ABLIM3O94929 683 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 CHRNB1P11230 501 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 CPB1P15086 417 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 FCARP24071 287 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 MCM4P33991 863 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 RBM25P49756 843 aaKnown RBP10.13□□□□□ -0.79
NEDD8-206ENST00000531430 EFNA5P52803 228 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 GUCY1B3Q02153 619 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 SOX4Q06945 474 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-206ENST00000531430 LRRC32Q14392 662 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 ZNF174Q15697 407 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 CSRP2Q16527 193 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 PRSS36Q5K4E3 855 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 LONP2Q86WA8 852 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 MAP4K3Q8IVH8 894 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 MFSD6LQ8IWD5 586 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 DIS3L2Q8IYB7 885 aaKnown RBP10.13□□□□□ -0.79
NEDD8-206ENST00000531430 TCEAL8Q8IYN2 117 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 CEP120Q8N960 986 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 C12orf50Q8NA57 414 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-206ENST00000531430 ACAP3Q96P50 834 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 PGLYRP2Q96PD5 576 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 TM6SF1Q9BZW5 370 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 ARRDC1-AS1Q9H2J1 176 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 TMEM60Q9H2L4 133 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 AVENQ9NQS1 362 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-206ENST00000531430 TOPORSQ9NS56 1045 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-206ENST00000531430 CEP72Q9P209 647 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 VWA8A3KMH1 1905 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 ARID2Q68CP9 1835 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 STK36Q9NRP7 1315 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 A0A1W2PRU2 124 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 TULP1O00294 542 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-206ENST00000531430 CTDNEP1O95476 244 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 TDGF1P13385 188 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 HOXC13P31276 330 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 CCT6AP40227 531 aaKnown RBP10.12□□□□□ -0.79
NEDD8-206ENST00000531430 MATR3P43243 847 aaKnown RBP eCLIP10.12□□□□□ -0.79
NEDD8-206ENST00000531430 PXNP49023 591 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-206ENST00000531430 CDR1P51861 262 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 PEX3P56589 373 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 GAS6Q14393 721 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 ZNF568Q3ZCX4 644 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 N4BP2L1Q5TBK1 243 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-206ENST00000531430 SLC8B1Q6J4K2 584 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 RNF19BQ6ZMZ0 732 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 SPEM1Q8N4L4 309 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 APPL2Q8NEU8 664 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 DEPDC1BQ8WUY9 529 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 C18orf25Q96B23 403 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-206ENST00000531430 ZFYVE19Q96K21 471 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 MTMR9Q96QG7 549 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 TARS2Q9BW92 718 aaKnown RBP10.12□□□□□ -0.79
NEDD8-206ENST00000531430 CCDC113Q9H0I3 377 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 SLC38A7Q9NVC3 462 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 TIMM13Q9Y5L4 95 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-206ENST00000531430 TRIP11Q15643 1979 aa10.12□□□□□ -0.79
NEDD8-206ENST00000531430 KMT2BQ9UMN6 2715 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-206ENST00000531430 SYN3O14994 580 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 LRP3O75074 770 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 MOSPD3O75425 235 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 MICAL2O94851 1124 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 OR4Q2P0C623 313 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 FDPSP14324 419 aaKnown RBP10.11□□□□□ -0.79
NEDD8-206ENST00000531430 CNR2P34972 360 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 EPHB3P54753 998 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 SPAG1Q07617 926 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 PON2Q15165 354 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 SAFBQ15424 915 aaKnown RBP eCLIP10.11□□□□□ -0.79
NEDD8-206ENST00000531430 SF3A2Q15428 464 aaKnown RBP10.11□□□□□ -0.79
NEDD8-206ENST00000531430 SEZ6Q53EL9 994 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 TPGS2Q68CL5 300 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 ZNF280DQ6N043 979 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 Q6ZS52 159 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 FAM160A2Q8N612 972 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-206ENST00000531430 DDX1Q92499 740 aaKnown RBP10.11□□□□□ -0.79
NEDD8-206ENST00000531430 DDX12PQ92771 950 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 ZMAT2Q96NC0 199 aaKnown RBP10.11□□□□□ -0.79
NEDD8-206ENST00000531430 TBC1D32Q96NH3 1257 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 IER2Q9BTL4 223 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 POLR3CQ9BUI4 534 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-206ENST00000531430 CDT1Q9H211 546 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 ATXN3LQ9H3M9 355 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 C8orf33Q9H7E9 229 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-206ENST00000531430 GTSE1Q9NYZ3 720 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 AFF4Q9UHB7 1163 aaKnown RBP10.11□□□□□ -0.79
NEDD8-206ENST00000531430 ANGPTL2Q9UKU9 493 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 KIAA1024Q9UPX6 916 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 TNFSF13BQ9Y275 285 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 SLC27A5Q9Y2P5 690 aa10.11□□□□□ -0.79
NEDD8-206ENST00000531430 CNOT1A5YKK6 2376 aaKnown RBP10.1□□□□□ -0.79
NEDD8-206ENST00000531430 SFI1A8K8P3 1242 aa10.1□□□□□ -0.79
NEDD8-206ENST00000531430 CCDC192P0DO97 292 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms