RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 MAGEA9P43362 315 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 AMACRQ9UHK6 382 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 CDYLQ9Y232 598 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 PER1O15534 1290 aaPredicted RBP15.35■□□□□ 0.05
LRRK1-207ENST00000531270 HSPA9P38646 679 aaKnown RBP15.35■□□□□ 0.05
LRRK1-207ENST00000531270 PTPN12Q05209 780 aaKnown RBP15.35■□□□□ 0.05
LRRK1-207ENST00000531270 CATSPER1Q8NEC5 780 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 AGPAT1Q99943 283 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 MTIF3Q9H2K0 278 aaKnown RBP15.35■□□□□ 0.05
LRRK1-207ENST00000531270 OLFML3Q9NRN5 406 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 RAB6BQ9NRW1 208 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 GYS1P13807 737 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 ALOX15P16050 662 aaPredicted RBP15.34■□□□□ 0.05
LRRK1-207ENST00000531270 YWHABP31946 246 aaKnown RBP15.34■□□□□ 0.05
LRRK1-207ENST00000531270 OR1G1P47890 313 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 FUT11Q495W5 492 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 KRT77Q7Z794 578 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 CALR3Q96L12 384 aaKnown RBP15.34■□□□□ 0.05
LRRK1-207ENST00000531270 ASB14A6NK59 587 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 PSMA3P25788 255 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 NMT1P30419 496 aaKnown RBP15.34■□□□□ 0.05
LRRK1-207ENST00000531270 STX3Q13277 289 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 CCDC92Q53HC0 331 aaPredicted RBP15.34■□□□□ 0.05
LRRK1-207ENST00000531270 TRIM72Q6ZMU5 477 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 LUZP2Q86TE4 346 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 F8W810 466 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 PDGFRAP16234 1089 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 GUCY1A3Q02108 690 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 TAP1Q03518 808 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 LONRF1Q17RB8 773 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 TRIM71Q2Q1W2 868 aaKnown RBP15.34■□□□□ 0.05
LRRK1-207ENST00000531270 QRICH1Q2TAL8 776 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 OLFML2BQ68BL8 750 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 C4orf33Q8N1A6 199 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 TTC39CQ8N584 583 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 SLC7A14Q8TBB6 771 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 WNK4Q96J92 1243 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 DEPDC7Q96QD5 511 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 KIF2CQ99661 725 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 SH3GL2Q99962 352 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.34■□□□□ 0.05
LRRK1-207ENST00000531270 ZC3H7BQ9UGR2 993 aaKnown RBP15.34■□□□□ 0.05
LRRK1-207ENST00000531270 ADAM21Q9UKJ8 722 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 SERPINB4P48594 390 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 NBPF9Q3BBW0 867 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 HAUS6Q7Z4H7 955 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 ATP6V1G3Q96LB4 118 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 MCEEQ96PE7 176 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 FAM187AA6NFU0 413 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 CLASP2O75122 1294 aaKnown RBP15.34■□□□□ 0.05
LRRK1-207ENST00000531270 STAT5BP51692 787 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 SNX17Q15036 470 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 STKLD1Q8NE28 680 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 PIGBQ92521 554 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 C18orf8Q96DM3 657 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 MTERF3Q96E29 417 aa15.34■□□□□ 0.05
LRRK1-207ENST00000531270 STRBPQ96SI9 672 aaKnown RBP15.34■□□□□ 0.05
LRRK1-207ENST00000531270 FYNP06241 537 aa15.33■□□□□ 0.05
LRRK1-207ENST00000531270 CCDC15Q0P6D6 951 aa15.33■□□□□ 0.05
LRRK1-207ENST00000531270 C16orf72Q14CZ0 275 aa15.33■□□□□ 0.05
LRRK1-207ENST00000531270 SPATA21Q7Z572 469 aa15.33■□□□□ 0.05
LRRK1-207ENST00000531270 FAM49BQ9NUQ9 324 aa15.33■□□□□ 0.05
LRRK1-207ENST00000531270 PBLDP30039 288 aaPredicted RBP15.33■□□□□ 0.04
LRRK1-207ENST00000531270 HLFQ16534 295 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 SHROOM1Q2M3G4 852 aaPredicted RBP15.33■□□□□ 0.04
LRRK1-207ENST00000531270 TSEN34Q9BSV6 310 aaKnown RBP15.33■□□□□ 0.04
LRRK1-207ENST00000531270 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.33■□□□□ 0.04
LRRK1-207ENST00000531270 GRID2IPA4D2P6 1211 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 F5H6K3 240 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 KLRC3Q07444 240 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 MTMR2Q13614 643 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 P3H2Q8IVL5 708 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 JPH1Q9HDC5 661 aaPredicted RBP15.33■□□□□ 0.04
LRRK1-207ENST00000531270 NSMCE4AQ9NXX6 385 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 SOX13Q9UN79 622 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 ATP10BO94823 1461 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 HEATR9A2RTY3 570 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 FAM47DPA6NHR8 397 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 ERVV-1B6SEH8 477 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 UTYO14607 1347 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 CAND2O75155 1236 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 RHOBTB1O94844 696 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 PTPN7P35236 360 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 DDX39BQ13838 428 aaKnown RBP15.33■□□□□ 0.04
LRRK1-207ENST00000531270 TMEM132DQ14C87 1099 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 SHCBP1LQ9BZQ2 653 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 SCN3BQ9NY72 215 aa15.33■□□□□ 0.04
LRRK1-207ENST00000531270 UTP6Q9NYH9 597 aaKnown RBP15.33■□□□□ 0.04
LRRK1-207ENST00000531270 DBR1Q9UK59 544 aaKnown RBP15.33■□□□□ 0.04
LRRK1-207ENST00000531270 M0R3G1 203 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 USP39Q53GS9 565 aaKnown RBP15.32■□□□□ 0.04
LRRK1-207ENST00000531270 PRPF18Q99633 342 aaKnown RBP15.32■□□□□ 0.04
LRRK1-207ENST00000531270 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 ATP1A1P05023 1023 aaKnown RBP15.32■□□□□ 0.04
LRRK1-207ENST00000531270 GUCA1AP43080 201 aaPredicted RBP15.32■□□□□ 0.04
LRRK1-207ENST00000531270 KCNK10P57789 538 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 ANKS6Q68DC2 871 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 C16orf62Q7Z3J2 963 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 MS4A14Q96JA4 679 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 RNPC3Q96LT9 517 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms