RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 PSMD5Q16401 504 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 ZNF658Q5TYW1 1059 aaPredicted RBP12.86□□□□□ -0.35
LTBP3-219ENST00000530990 C9orf57Q5W0N0 161 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 LMBRD2Q68DH5 695 aaPredicted RBP12.86□□□□□ -0.35
LTBP3-219ENST00000530990 GLYCTKQ8IVS8 523 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 PIK3R5Q8WYR1 880 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 TTPALQ9BTX7 342 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 EMILIN2Q9BXX0 1053 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 KIAA1586Q9HCI6 787 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 LMBRD1Q9NUN5 540 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 DPP3Q9NY33 737 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 CLEC1BQ9P126 229 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 MAN1B1Q9UKM7 699 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 TRAF3IP3Q9Y228 551 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 SSX2IPQ9Y2D8 614 aa12.86□□□□□ -0.35
LTBP3-219ENST00000530990 ANO9A1A5B4 782 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 PIRO00625 290 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 TRAPPC3O43617 180 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 CALUO43852 315 aaPredicted RBP12.85□□□□□ -0.35
LTBP3-219ENST00000530990 EXOC3O60645 756 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 EPCAMP16422 314 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 KLRC2P26717 231 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 PRCPP42785 496 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 CYP24A1Q07973 514 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 CLUL1Q15846 466 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 ZCWPW2Q504Y3 356 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 TJAP1Q5JTD0 557 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 ISM2Q6H9L7 571 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 NT5DC4Q86YG4 428 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 SLC9A9Q8IVB4 645 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 C1orf127Q8N9H9 656 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 LNX1Q8TBB1 728 aaPredicted RBP12.85□□□□□ -0.35
LTBP3-219ENST00000530990 SLC22A17Q8WUG5 538 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 ATXN2LQ8WWM7 1075 aaKnown RBP12.85□□□□□ -0.35
LTBP3-219ENST00000530990 SUSD3Q96L08 255 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 RXFP1Q9HBX9 757 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 DMAC2Q9NW81 257 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 DENND4AQ7Z401 1863 aa12.85□□□□□ -0.35
LTBP3-219ENST00000530990 CUL9Q8IWT3 2517 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 SPTLC1O15269 473 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 ITGB3P05106 788 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 ADH1AP07327 375 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 TMEM191BP0C7N4 346 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 SRGAP2BP0DMP2 458 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 DLATP10515 647 aaKnown RBP12.84□□□□□ -0.35
LTBP3-219ENST00000530990 AARSP49588 968 aaKnown RBP eCLIP12.84□□□□□ -0.35
LTBP3-219ENST00000530990 CASP4P49662 377 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 CLCN4P51793 760 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 MRPS5P82675 430 aaKnown RBP12.84□□□□□ -0.35
LTBP3-219ENST00000530990 CREMQ03060 361 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 PSMD6Q15008 389 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 CAMK4Q16566 473 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 AAK1Q2M2I8 961 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 LEXMQ3ZCV2 418 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 COBLL1Q53SF7 1204 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 SCARA3Q6AZY7 606 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 TMEM184AQ6ZMB5 413 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 WDR49Q8IV35 697 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.84□□□□□ -0.35
LTBP3-219ENST00000530990 PLEKHO2Q8TD55 490 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 TMEM174Q8WUU8 243 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 CASP10Q92851 521 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 MSLNLQ96KJ4 702 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 ASB2Q96Q27 587 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 CGRRF1Q99675 332 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
LTBP3-219ENST00000530990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
LTBP3-219ENST00000530990 FNIP2Q9P278 1114 aa12.84□□□□□ -0.35
LTBP3-219ENST00000530990 M0QZQ0 153 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 BIN1O00499 593 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 SYN3O14994 580 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 ADAM12O43184 909 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 BMP6P22004 513 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 NR2F2P24468 414 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
LTBP3-219ENST00000530990 TAF6P49848 677 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 LILRA4P59901 499 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 SURF1Q15526 300 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 NFIL3Q16649 462 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 VARS2Q5ST30 1063 aaKnown RBP12.83□□□□□ -0.36
LTBP3-219ENST00000530990 CEP135Q66GS9 1140 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 ANKRD54Q6NXT1 300 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 ANKS3Q6ZW76 656 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 PPFIBP1Q86W92 1011 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 SMRP1Q8NCR6 262 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 CXorf38Q8TB03 319 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 CACTINQ8WUQ7 758 aaKnown RBP12.83□□□□□ -0.36
LTBP3-219ENST00000530990 CCDC127Q96BQ5 260 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 MFSD14AQ96MC6 490 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 ZNF560Q96MR9 790 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 POP1Q99575 1024 aaKnown RBP12.83□□□□□ -0.36
LTBP3-219ENST00000530990 CLSTN3Q9BQT9 956 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 CLSTN2Q9H4D0 955 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 MTRRQ9UBK8 725 aa12.83□□□□□ -0.36
LTBP3-219ENST00000530990 SIX4Q9UIU6 781 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms