RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 LMAN2LQ9H0V9 348 aa17.33■□□□□ 0.36
BRK1-201ENST00000530758 ADAM28Q9UKQ2 775 aa17.33■□□□□ 0.36
BRK1-201ENST00000530758 EPOPA6NHQ4 379 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 PMM2O15305 246 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 LPXNO60711 386 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 B3GAT3O94766 335 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 TNNC2P02585 160 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 TMEM191BP0C7N4 346 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 CAMK1Q14012 370 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 NCAPHQ15003 741 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 ZACNQ401N2 412 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 TRIM59Q8IWR1 403 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 GPR65Q8IYL9 337 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 LRRC52Q8N7C0 313 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 ARNTL2Q8WYA1 636 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 SLC35C1Q96A29 364 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 MTMR12Q9C0I1 747 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 LMCD1Q9NZU5 365 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 CACNG4Q9UBN1 327 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 SIX4Q9UIU6 781 aa17.32■□□□□ 0.36
BRK1-201ENST00000530758 PRG3Q9Y2Y8 225 aaPredicted RBP17.32■□□□□ 0.36
BRK1-201ENST00000530758 VWA8A3KMH1 1905 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 F8W810 466 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 STX10O60499 249 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 TADA2AO75478 443 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 KIF4AO95239 1232 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 STAU1O95793 577 aaKnown RBP17.31■□□□□ 0.36
BRK1-201ENST00000530758 CST3P01034 146 aaPredicted RBP17.31■□□□□ 0.36
BRK1-201ENST00000530758 IGFBP6P24592 240 aaPredicted RBP17.31■□□□□ 0.36
BRK1-201ENST00000530758 PNPLA4P41247 253 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 GUCY2FP51841 1108 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 LILRA4P59901 499 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 RBP5P82980 135 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 PPP3CAQ08209 521 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 ELAVL2Q12926 359 aaKnown RBP17.31■□□□□ 0.36
BRK1-201ENST00000530758 LMBRD2Q68DH5 695 aaPredicted RBP17.31■□□□□ 0.36
BRK1-201ENST00000530758 SV2AQ7L0J3 742 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 RABGGTAQ92696 567 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 VN1R3Q9BXE9 311 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 CERS4Q9HA82 394 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 CHST7Q9NS84 486 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 PUF60Q9UHX1 559 aaKnown RBP17.31■□□□□ 0.36
BRK1-201ENST00000530758 MTUS1Q9ULD2 1270 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 NFE2L3Q9Y4A8 694 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 COL4A4P53420 1690 aaPredicted RBP17.31■□□□□ 0.36
BRK1-201ENST00000530758 ATG2AQ2TAZ0 1938 aa17.31■□□□□ 0.36
BRK1-201ENST00000530758 M0QZQ0 153 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 PPEF2O14830 753 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 GRM6O15303 877 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 TRAPPC3O43617 180 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 SOD2P04179 222 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 ITGB3P05106 788 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 DNAJB1P25685 340 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 ZNF445P59923 1031 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 MYL5Q02045 173 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 IQCB1Q15051 598 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 TPD52L1Q16890 204 aaPredicted RBP17.3■□□□□ 0.36
BRK1-201ENST00000530758 CCDC40Q4G0X9 1142 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 CDKAL1Q5VV42 579 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 TDRD10Q5VZ19 366 aaKnown RBP17.3■□□□□ 0.36
BRK1-201ENST00000530758 SCARA3Q6AZY7 606 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 PDE12Q6L8Q7 609 aaKnown RBP17.3■□□□□ 0.36
BRK1-201ENST00000530758 FUT10Q6P4F1 479 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 FAM114A1Q8IWE2 563 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 TMEM130Q8N3G9 435 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 POF1BQ8WVV4 589 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 SUSD3Q96L08 255 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 GPR62Q9BZJ7 368 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 VRTNQ9H8Y1 702 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 TMEM8AQ9HCN3 771 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 ALG13Q9NP73 1137 aaKnown RBP17.3■□□□□ 0.36
BRK1-201ENST00000530758 SAMSN1Q9NSI8 373 aaKnown RBP17.3■□□□□ 0.36
BRK1-201ENST00000530758 COQ4Q9Y3A0 265 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 IRAK3Q9Y616 596 aa17.3■□□□□ 0.36
BRK1-201ENST00000530758 SF3B1O75533 1304 aaKnown RBP eCLIP17.29■□□□□ 0.36
BRK1-201ENST00000530758 SMTNL1A8MU46 457 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 RFXAPO00287 272 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 FSCN2O14926 492 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 TRIM49P0CI25 452 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 TRIM49CP0CI26 452 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 PRKCSHP14314 528 aaPredicted RBP17.29■□□□□ 0.36
BRK1-201ENST00000530758 FGFR3P22607 806 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 EEF1GP26641 437 aaKnown RBP17.29■□□□□ 0.36
BRK1-201ENST00000530758 ATICP31939 592 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 ZNF165P49910 485 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 TIGD5Q53EQ6 642 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 KRT39Q6A163 491 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 LRSAM1Q6UWE0 723 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 DHX40Q8IX18 779 aaKnown RBP17.29■□□□□ 0.36
BRK1-201ENST00000530758 FAM84AQ96KN4 292 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
BRK1-201ENST00000530758 HERC2P3Q9BVR0 1158 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 HSD3B7Q9H2F3 369 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 GDAP2Q9NXN4 497 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 AGAP1Q9UPQ3 857 aa17.29■□□□□ 0.36
BRK1-201ENST00000530758 LRRC10BA6NIK2 292 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 SYN3O14994 580 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 SPTLC1O15269 473 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 P4HA2O15460 535 aa17.28■□□□□ 0.36
BRK1-201ENST00000530758 LILRB3O75022 631 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms