RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 NRDE2Q9H7Z3 1164 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 RMI1Q9H9A7 625 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 SPATS2LQ9NUQ6 558 aaKnown RBP4.54□□□□□ -1.68
CTR9-205ENST00000529898 USP25Q9UHP3 1055 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 ITGB1BP2Q9UKP3 347 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 CLCA2Q9UQC9 943 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 REXO2Q9Y3B8 237 aaKnown RBP4.54□□□□□ -1.68
CTR9-205ENST00000529898 WDR62O43379 1518 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 FANCD2Q9BXW9 1451 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 COL4A3Q01955 1670 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 NCOA1Q15788 1441 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 TARBP1Q13395 1621 aaKnown RBP4.54□□□□□ -1.68
CTR9-205ENST00000529898 ZMYM3Q14202 1370 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 TONSLQ96HA7 1378 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.53□□□□□ -1.68
CTR9-205ENST00000529898 AHRRA9YTQ3 701 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 MYO1CO00159 1063 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 TIMM44O43615 452 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 KDM1AO60341 852 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 PDE8AO60658 829 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 FAM20BO75063 409 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 TMEM127O75204 238 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 TPPPO94811 219 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 SMC2O95347 1197 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 GASTP01350 101 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 ITGB1P05556 798 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 CCDC159P0C7I6 412 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 GYPEP15421 78 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 PAX3P23760 479 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 DUSP2Q05923 314 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 MGAT5Q09328 741 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 PDCD1Q15116 288 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 CSRP2Q16527 193 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 DDB1Q16531 1140 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 MMS22LQ6ZRQ5 1243 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 MIPOL1Q8TD10 442 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 SNX33Q8WV41 574 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 PAWRQ96IZ0 340 aaKnown RBP4.53□□□□□ -1.68
CTR9-205ENST00000529898 CPPED1Q9BRF8 314 aaPredicted RBP4.53□□□□□ -1.68
CTR9-205ENST00000529898 CRACR2AQ9BSW2 395 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 NDC1Q9BTX1 674 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 UTP14AQ9BVJ6 771 aaKnown RBP4.53□□□□□ -1.68
CTR9-205ENST00000529898 ANO3Q9BYT9 981 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 FAM107BQ9H098 131 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 KCNH6Q9H252 994 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 RETREG1Q9H6L5 497 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 IRAK4Q9NWZ3 460 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 DKK2Q9UBU2 259 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 SWAP70Q9UH65 585 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 BLOC1S6Q9UL45 172 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 ODF2LQ9ULJ1 636 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 CDY2AQ9Y6F7 541 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 MBD5Q9P267 1494 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 FMN1Q68DA7 1419 aa4.53□□□□□ -1.68
CTR9-205ENST00000529898 KDM5CP41229 1560 aa4.53□□□□□ -1.69
CTR9-205ENST00000529898 URB2Q14146 1524 aaKnown RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 NPHP1O15259 732 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 CAND2O75155 1236 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 RECQL4O94761 1208 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 IVLP07476 585 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 HARSP12081 509 aaKnown RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 MYCLP1P12525 358 aaPredicted RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 KCNA2P16389 499 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 HK1P19367 917 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 YY1P25490 414 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 GYS2P54840 703 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 HNRNPH2P55795 449 aaKnown RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 DEUP1Q05D60 604 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 PPARAQ07869 468 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 CRYMQ14894 314 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 FSCN1Q16658 493 aaKnown RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 ATP13A4Q4VNC1 1196 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 DNAJC21Q5F1R6 531 aaKnown RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 LAIR1Q6GTX8 287 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 CAVIN1Q6NZI2 390 aaKnown RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 C16orf87Q6PH81 154 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 BTNL9Q6UXG8 535 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 LRRC55Q6ZSA7 311 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 CCDC186Q7Z3E2 898 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 THNSL2Q86YJ6 484 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 LEO1Q8WVC0 666 aaPredicted RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 DNAAF4Q8WXU2 420 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 PGBD4Q96DM1 585 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 MYEOVQ96EZ4 313 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 DCLRE1CQ96SD1 692 aaKnown RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 SLC46A2Q9BY10 475 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 RSPH9Q9H1X1 276 aaPredicted RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 SLKQ9H2G2 1235 aaPredicted RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 CTNNA3Q9UI47 895 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 NOC2LQ9Y3T9 749 aaKnown RBP4.52□□□□□ -1.69
CTR9-205ENST00000529898 CHST2Q9Y4C5 530 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.52□□□□□ -1.69
CTR9-205ENST00000529898 ARHGAP31Q2M1Z3 1444 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 ADAMTS12P58397 1594 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 CDC42BPAQ5VT25 1732 aa4.52□□□□□ -1.69
CTR9-205ENST00000529898 SPAG9O60271 1321 aaKnown RBP4.51□□□□□ -1.69
CTR9-205ENST00000529898 ADCY10Q96PN6 1610 aa4.51□□□□□ -1.69
CTR9-205ENST00000529898 SHTN1A0MZ66 631 aa4.51□□□□□ -1.69
CTR9-205ENST00000529898 TMEM200CA6NKL6 621 aa4.51□□□□□ -1.69
CTR9-205ENST00000529898 RAMP2O60895 175 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms