RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 PHLDB3Q6NSJ2 640 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 RTL10Q7L3V2 364 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 ELMOD1Q8N336 334 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 KCTD17Q8N5Z5 321 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 AK8Q96MA6 479 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 ZNF512Q96ME7 567 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-204ENST00000529288 RPF1Q9H9Y2 349 aaKnown RBP14.16□□□□□ -0.14
CPSF1-204ENST00000529288 TBX20Q9UMR3 447 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 INSL5Q9Y5Q6 135 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 R4GN57 208 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 ARHGEF37A1IGU5 675 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 TRAK2O60296 914 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 POU2F2P09086 479 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 OR4Q2P0C623 313 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 MYL4P12829 197 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 CD72P21854 359 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 TWF1Q12792 350 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 MRPL58Q14197 206 aaKnown RBP14.15□□□□□ -0.14
CPSF1-204ENST00000529288 MLF2Q15773 248 aaPredicted RBP14.15□□□□□ -0.14
CPSF1-204ENST00000529288 ZBTB41Q5SVQ8 909 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 CYP4A22Q5TCH4 519 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 IQCEQ6IPM2 695 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 RNF19BQ6ZMZ0 732 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 PDZD4Q76G19 769 aaPredicted RBP14.15□□□□□ -0.14
CPSF1-204ENST00000529288 USP37Q86T82 979 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 HS6ST3Q8IZP7 471 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 ADSSL1Q8N142 457 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 LRRC15Q8TF66 581 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 RAD54LQ92698 747 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 TCEAL4Q96EI5 215 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 PGLYRP2Q96PD5 576 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 MSTO1Q9BUK6 570 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 PLA2G2FQ9BZM2 168 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 PLEKHA5Q9HAU0 1116 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 PARVGQ9HBI0 331 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 ODF2LQ9ULJ1 636 aa14.15□□□□□ -0.14
CPSF1-204ENST00000529288 UBQLN1Q9UMX0 589 aaKnown RBP14.15□□□□□ -0.14
CPSF1-204ENST00000529288 FAM170BA6NMN3 283 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 ZNF197O14709 1029 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 XPOTO43592 962 aaKnown RBP14.14□□□□□ -0.15
CPSF1-204ENST00000529288 TBC1D4O60343 1298 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 BMP15O95972 392 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 GJA1P17302 382 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 NMT1P30419 496 aaKnown RBP14.14□□□□□ -0.15
CPSF1-204ENST00000529288 LONP1P36776 959 aaKnown RBP14.14□□□□□ -0.15
CPSF1-204ENST00000529288 STARD6P59095 220 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 PFKPQ01813 784 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 YWHAHQ04917 246 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-204ENST00000529288 GRM2Q14416 872 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 TPGS2Q68CL5 300 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 TANGO2Q6ICL3 276 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 BRAPQ7Z569 592 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 TCEAL8Q8IYN2 117 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 PJA1Q8NG27 643 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 BLOC1S4Q9NUP1 217 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 SPATA6Q9NWH7 488 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-204ENST00000529288 GDE1Q9NZC3 331 aa14.14□□□□□ -0.15
CPSF1-204ENST00000529288 AFF4Q9UHB7 1163 aaKnown RBP14.14□□□□□ -0.15
CPSF1-204ENST00000529288 MTF2Q9Y483 593 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-204ENST00000529288 KANSL1LA0AUZ9 987 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 TTC26A0AVF1 554 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 OGTO15294 1046 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 SLC26A4O43511 780 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 ECI2O75521 394 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 CDR1P51861 262 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 CEBPZQ03701 1054 aaKnown RBP14.13□□□□□ -0.15
CPSF1-204ENST00000529288 PRKCQQ04759 706 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 ENOX2Q16206 610 aaKnown RBP14.13□□□□□ -0.15
CPSF1-204ENST00000529288 KYAT1Q16773 422 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 JADE1Q6IE81 842 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 TPRG1Q6ZUI0 275 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 DYMQ7RTS9 669 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 C1orf210Q8IVY1 113 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 BEST2Q8NFU1 509 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 BCO2Q9BYV7 579 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 CLIC4Q9Y696 253 aa14.13□□□□□ -0.15
CPSF1-204ENST00000529288 ZFHX2Q9C0A1 2572 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-204ENST00000529288 PPEF2O14830 753 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 GLULP15104 373 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 LRPAP1P30533 357 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 CCR2P41597 374 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 ACOT2P49753 483 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 ZC2HC1CQ53FD0 456 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-204ENST00000529288 FAM78AQ5JUQ0 283 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 ADALQ6DHV7 355 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 POTEHQ6S545 545 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 KRI1Q8N9T8 703 aaKnown RBP14.12□□□□□ -0.15
CPSF1-204ENST00000529288 LARP4BQ92615 738 aaKnown RBP14.12□□□□□ -0.15
CPSF1-204ENST00000529288 EPSTI1Q96J88 318 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 HINFPQ9BQA5 517 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 SLITRK6Q9H5Y7 841 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 BRD9Q9H8M2 597 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 ZFP14Q9HCL3 533 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 ASAH2Q9NR71 780 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 HEBP1Q9NRV9 189 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 DLGAP2Q9P1A6 1054 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 CEP72Q9P209 647 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 SLC27A5Q9Y2P5 690 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms