RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 WDFY4Q6ZS81 3184 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 ANKRD63C9JTQ0 380 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 CUTAO60888 179 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 OAZ2O95190 189 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 F13A1P00488 732 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 ADSSP30520 456 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 MATR3P43243 847 aaKnown RBP eCLIP13.11□□□□□ -0.31
COPB1-206ENST00000529210 NUBP1P53384 320 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 ROR1Q01973 937 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 ZC2HC1CQ53FD0 456 aaPredicted RBP13.11□□□□□ -0.31
COPB1-206ENST00000529210 ZBTB41Q5SVQ8 909 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 AXDND1Q5T1B0 1012 aaPredicted RBP13.11□□□□□ -0.31
COPB1-206ENST00000529210 L1TD1Q5T7N2 865 aaKnown RBP13.11□□□□□ -0.31
COPB1-206ENST00000529210 TPGS2Q68CL5 300 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 APPL2Q8NEU8 664 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 KCNG4Q8TDN1 519 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 PRRX2Q99811 253 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 LRRC27Q9C0I9 530 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 ZHX3Q9H4I2 956 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 KCNK12Q9HB15 430 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 AVENQ9NQS1 362 aaPredicted RBP13.11□□□□□ -0.31
COPB1-206ENST00000529210 TUBGCP4Q9UGJ1 667 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 PCDHB8Q9UN66 801 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 DUSP12Q9UNI6 340 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 PCDHB13Q9Y5F0 798 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 NOTCH4Q99466 2003 aa13.11□□□□□ -0.31
COPB1-206ENST00000529210 DOCK6Q96HP0 2047 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 ANO9A1A5B4 782 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 WDR27A2RRH5 827 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 ANHXE9PGG2 379 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 I3L4J1 428 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 XYLBO75191 536 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 ASGR2P07307 311 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 LAMP2P13473 410 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 ATF2P15336 505 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 MCM4P33991 863 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 TDGQ13569 410 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 PPM1LQ5SGD2 360 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 ADALQ6DHV7 355 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 CRELD2Q6UXH1 353 aaPredicted RBP13.1□□□□□ -0.31
COPB1-206ENST00000529210 NT5DC4Q86YG4 428 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 TCEAL8Q8IYN2 117 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 BEST2Q8NFU1 509 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 SLC7A14Q8TBB6 771 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 ACCSQ96QU6 501 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 MYADMQ96S97 322 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 MRPL44Q9H9J2 332 aaKnown RBP13.1□□□□□ -0.31
COPB1-206ENST00000529210 MAGEF1Q9HAY2 307 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 PIDD1Q9HB75 910 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 FBXL5Q9UKA1 691 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
COPB1-206ENST00000529210 KCNH3Q9ULD8 1083 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 EXOC7Q9UPT5 735 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
COPB1-206ENST00000529210 PIRO00625 290 aa13.09□□□□□ -0.31
COPB1-206ENST00000529210 TYMPP19971 482 aa13.09□□□□□ -0.31
COPB1-206ENST00000529210 GARTP22102 1010 aa13.09□□□□□ -0.31
COPB1-206ENST00000529210 JADE1Q6IE81 842 aa13.09□□□□□ -0.31
COPB1-206ENST00000529210 ZNF280DQ6N043 979 aa13.09□□□□□ -0.31
COPB1-206ENST00000529210 SHC4Q6S5L8 630 aa13.09□□□□□ -0.31
COPB1-206ENST00000529210 SUGP1Q8IWZ8 645 aaKnown RBP13.09□□□□□ -0.31
COPB1-206ENST00000529210 FAM122AQ96E09 287 aa13.09□□□□□ -0.31
COPB1-206ENST00000529210 TRIM9Q9C026 710 aa13.09□□□□□ -0.31
COPB1-206ENST00000529210 TFIP11Q9UBB9 837 aaKnown RBP13.09□□□□□ -0.31
COPB1-206ENST00000529210 TSC2P49815 1807 aa13.09□□□□□ -0.31
COPB1-206ENST00000529210 TISP43B9A030 160 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 IL18RAPO95256 599 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 LDHAP00338 332 aaKnown RBP13.08□□□□□ -0.32
COPB1-206ENST00000529210 HSP90AA1P07900 732 aaKnown RBP13.08□□□□□ -0.32
COPB1-206ENST00000529210 MYBP10242 640 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 FSHRP23945 695 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 GBP2P32456 591 aaPredicted RBP13.08□□□□□ -0.32
COPB1-206ENST00000529210 ACOT2P49753 483 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 CASP5P51878 434 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 LILRA4P59901 499 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 AMPD3Q01432 767 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 SPAG1Q07617 926 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 KCNA1Q09470 495 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 TMEM132DQ14C87 1099 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 CTXN3Q4LDR2 81 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
COPB1-206ENST00000529210 CCDC65Q8IXS2 484 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 PDILTQ8N807 584 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 IQUBQ8NA54 791 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 POMGNT1Q8WZA1 660 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 TMEM206Q9H813 350 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 PANK4Q9NVE7 773 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 AFF4Q9UHB7 1163 aaKnown RBP13.08□□□□□ -0.32
COPB1-206ENST00000529210 RCOR1Q9UKL0 485 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 CFAP45Q9UL16 551 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 CDH7Q9ULB5 785 aa13.08□□□□□ -0.32
COPB1-206ENST00000529210 SCN1AP35498 2009 aa13.07□□□□□ -0.32
COPB1-206ENST00000529210 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
COPB1-206ENST00000529210 EIF3DO15371 548 aaKnown RBP eCLIP13.07□□□□□ -0.32
COPB1-206ENST00000529210 MICAL2O94851 1124 aa13.07□□□□□ -0.32
COPB1-206ENST00000529210 GCNT3O95395 438 aa13.07□□□□□ -0.32
COPB1-206ENST00000529210 CYP11A1P05108 521 aa13.07□□□□□ -0.32
COPB1-206ENST00000529210 NFICP08651 508 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms