RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 GORASP1Q9BQQ3 440 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 GYG2O15488 501 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 RALAP11233 206 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 SNAP25P60880 206 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 KPNB1Q14974 876 aaKnown RBP15.54■□□□□ 0.08
CAPN1-214ENST00000528165 CTC1Q2NKJ3 1217 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 PCNX4Q63HM2 1172 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 ACAD10Q6JQN1 1059 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 LVRNQ6Q4G3 990 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 SLC30A10Q6XR72 485 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 MRRFQ96E11 262 aaKnown RBP15.54■□□□□ 0.08
CAPN1-214ENST00000528165 KREMEN1Q96MU8 473 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 TUBB6Q9BUF5 446 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 METTL5Q9NRN9 209 aaKnown RBP15.54■□□□□ 0.08
CAPN1-214ENST00000528165 ANKFY1Q9P2R3 1169 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 NARFQ9UHQ1 456 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 DCTN4Q9UJW0 460 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 K7ENM7 598 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 RNF8O76064 485 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 HAUS5O94927 633 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 TJP3O95049 919 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 PLS3P13797 630 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 HOXA13P31271 388 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-214ENST00000528165 CCNG2Q16589 344 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 ACSBG2Q5FVE4 666 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 VPS52Q8N1B4 723 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 BICD1Q96G01 975 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 SYNCQ9H7C4 482 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 VPS37BQ9H9H4 285 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 CFAP69A5D8W1 941 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 MAP3K7O43318 606 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 PSMG1O95456 288 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 IL1R1P14778 569 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 SSR1P43307 286 aaKnown RBP15.53■□□□□ 0.08
CAPN1-214ENST00000528165 SEPT7Q16181 437 aaKnown RBP15.53■□□□□ 0.08
CAPN1-214ENST00000528165 SHC3Q92529 594 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 GBP5Q96PP8 586 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 LBHD1Q9BQE6 289 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-214ENST00000528165 CDCA7Q9BWT1 371 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-214ENST00000528165 GSC2O15499 205 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 SLC1A1P43005 524 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 DYNC1I2Q13409 638 aaKnown RBP15.53■□□□□ 0.08
CAPN1-214ENST00000528165 FOXB2Q5VYV0 432 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 SLFN13Q68D06 897 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 CAPN12Q6ZSI9 719 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 OTOP1Q7RTM1 612 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 FBXO11Q86XK2 927 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 SCYL3Q8IZE3 742 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 DTX3LQ8TDB6 740 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 NACC1Q96RE7 527 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 TIPINQ9BVW5 301 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 DDX4Q9NQI0 724 aaKnown RBP15.53■□□□□ 0.08
CAPN1-214ENST00000528165 KCND2Q9NZV8 630 aa15.53■□□□□ 0.08
CAPN1-214ENST00000528165 TISP43B9A030 160 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 PIK3CDO00329 1044 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 TYROBPO43914 113 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 TBX10O75333 385 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 GPSM2P81274 684 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 AP1B1Q10567 949 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 PLEKHG4Q58EX7 1191 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 HP1BP3Q5SSJ5 553 aaPredicted RBP15.52■□□□□ 0.08
CAPN1-214ENST00000528165 ANKS1BQ7Z6G8 1248 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 DRAXINQ8NBI3 349 aaPredicted RBP15.52■□□□□ 0.08
CAPN1-214ENST00000528165 DCAF4Q8WV16 495 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 FAM192AQ9GZU8 254 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 TMEM117Q9H0C3 514 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 ARL8BQ9NVJ2 186 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 PDP2Q9P2J9 529 aa15.52■□□□□ 0.08
CAPN1-214ENST00000528165 A0A0G2JND7 137 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 FGFR1P11362 822 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 BMP3P12645 472 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 CETN2P41208 172 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 IKQ13123 557 aaPredicted RBP15.52■□□□□ 0.07
CAPN1-214ENST00000528165 KLF1Q13351 362 aaPredicted RBP15.52■□□□□ 0.07
CAPN1-214ENST00000528165 C1orf220Q5T0J3 134 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.52■□□□□ 0.07
CAPN1-214ENST00000528165 DDX27Q96GQ7 796 aaKnown RBP15.52■□□□□ 0.07
CAPN1-214ENST00000528165 NSL1Q96IY1 281 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 CBWD1Q9BRT8 395 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 ADAM33Q9BZ11 813 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 TMX4Q9H1E5 349 aaPredicted RBP15.52■□□□□ 0.07
CAPN1-214ENST00000528165 TMEM206Q9H813 350 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 IRAK4Q9NWZ3 460 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 STX18Q9P2W9 335 aaKnown RBP15.52■□□□□ 0.07
CAPN1-214ENST00000528165 NUMBLQ9Y6R0 609 aa15.52■□□□□ 0.07
CAPN1-214ENST00000528165 XIRP1Q702N8 1843 aaKnown RBP15.52■□□□□ 0.07
CAPN1-214ENST00000528165 ATRNL1Q5VV63 1379 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 A0A1W2PPM1 405 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 WDR91A4D1P6 747 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 C6orf229H3BNL8 230 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 KCNQ2O43526 872 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 SERPINB4P48594 390 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 OVGP1Q12889 678 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 MAPK6Q16659 721 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 XXYLT1Q8NBI6 393 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 EPAS1Q99814 870 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 HEY2Q9UBP5 337 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 ARHGEF35A5YM69 484 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 F5H6K3 240 aa15.51■□□□□ 0.07
CAPN1-214ENST00000528165 KRT4P19013 534 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms