RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TNFSF9P41273 254 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 CLCN5P51795 746 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 PMS1P54277 932 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 BCAR1P56945 870 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 STX17P56962 302 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 ZCWPW2Q504Y3 356 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 SLFN12LQ6IEE8 588 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 SASS6Q6UVJ0 657 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 NELFBQ8WX92 580 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 B3GALT6Q96L58 329 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 GTPBP4Q9BZE4 634 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 S1PR5Q9H228 398 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 MARCH5Q9NX47 278 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 HSPBP1Q9NZL4 362 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 PARP2Q9UGN5 583 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 CDH22Q9UJ99 828 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 AGO2Q9UKV8 859 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 STYXL1Q9Y6J8 313 aa12.56□□□□□ -0.4
CCDC90B-210ENST00000528149 FASNP49327 2511 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 ZNF623O75123 536 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 EOMESO95936 686 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 NR3C1P04150 777 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 CXCL8P10145 99 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 SKIP12755 728 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 GARTP22102 1010 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 GRM5P41594 1212 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 ACOT2P49753 483 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 WNT7BP56706 349 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 TYRO3Q06418 890 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 SPAG1Q07617 926 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 PAK1Q13153 545 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 STX1AQ16623 288 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 ZSCAN23Q3MJ62 389 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 KCNT2Q6UVM3 1135 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 C11orf57Q6ZUT1 292 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 TAS1R1Q7RTX1 841 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 CCDC105Q8IYK2 499 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 HACE1Q8IYU2 909 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 ABI1Q8IZP0 508 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 SLC39A11Q8N1S5 342 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 LRRC43Q8N309 656 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 FLCNQ8NFG4 579 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 HASPINQ8TF76 798 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 HINFPQ9BQA5 517 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 CCDC94Q9BW85 323 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 GZF1Q9H116 711 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 GOLGA2P5Q9HBQ8 144 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 RALYQ9UKM9 306 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 PRG3Q9Y2Y8 225 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 SCN1AP35498 2009 aa12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 ANKRD11Q6UB99 2663 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-210ENST00000528149 HIDE1A8MVS5 230 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 C2CD4DB7Z1M9 353 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 PDXKO00764 312 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 PI15O43692 258 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 CALUO43852 315 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 ASGR2P07307 311 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 ADRB2P07550 413 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 NR2F2P24468 414 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 CCNE1P24864 410 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 PPP1R2P41236 205 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 SOX4Q06945 474 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 COL9A2Q14055 689 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 NAB2Q15742 525 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 ENOX2Q16206 610 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 DUSP6Q16828 381 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 RSPO4Q2I0M5 234 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 PLPP4Q5VZY2 271 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 SCARA3Q6AZY7 606 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 CENPPQ6IPU0 288 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 SYCE2Q6PIF2 218 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 GLB1LQ6UWU2 654 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 FAM43BQ6ZT52 329 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 C12orf56Q8IXR9 622 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 GPD1LQ8N335 351 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 MLKLQ8NB16 471 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 GOLGA5Q8TBA6 731 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 PGBD4Q96DM1 585 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 EEF2KMTQ96G04 330 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 DHTKD1Q96HY7 919 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 TSG101Q99816 390 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 FAM213AQ9BRX8 229 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 CGNQ9P2M7 1197 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 NR2E1Q9Y466 385 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 R4GN57 208 aa12.54□□□□□ -0.4
CCDC90B-210ENST00000528149 CASTOR2A6NHX0 329 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 TULP1O00294 542 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 EXTL3O43909 919 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 GALTP07902 379 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 CLTAP09496 248 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 AOC1P19801 751 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 CASP4P49662 377 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 GUCY2FP51841 1108 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 SNRPFP62306 86 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 CEP135Q66GS9 1140 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 ANKRD40Q6AI12 368 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 TTI2Q6NXR4 508 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 ANKRD54Q6NXT1 300 aa12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 CRELD2Q6UXH1 353 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-210ENST00000528149 CBWD2Q8IUF1 395 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms