RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 DTHD1Q6ZMT9 781 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 MAEAQ7L5Y9 396 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 LONP2Q86WA8 852 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 SPEM1Q8N4L4 309 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 KIFAP3Q92845 792 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 PAAF1Q9BRP4 392 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 KIAA1024Q9UPX6 916 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.56□□□□□ -0.56
CPSF1-203ENST00000527916 PIAS3Q9Y6X2 628 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 DSPP15924 2871 aaKnown RBP11.55□□□□□ -0.56
CPSF1-203ENST00000527916 ACKR2O00590 384 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 CEBPBP17676 345 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 PSMC3P17980 439 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 GJB2P29033 226 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 GDI1P31150 447 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 ELF1P32519 619 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 EFNA5P52803 228 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 MAPK6Q16659 721 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 SLC5A9Q2M3M2 681 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 KRT79Q5XKE5 535 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 FAM160A2Q8N612 972 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-203ENST00000527916 SNX29Q8TEQ0 813 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 DEPDC1BQ8WUY9 529 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 MSANTD3Q96H12 275 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 IFT74Q96LB3 600 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 BHMT2Q9H2M3 363 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 ZNF334Q9HCZ1 680 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-203ENST00000527916 MTRRQ9UBK8 725 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 CACNG4Q9UBN1 327 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 DNM3Q9UQ16 869 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 CDY1Q9Y6F8 540 aa11.55□□□□□ -0.56
CPSF1-203ENST00000527916 PRRG1O14668 218 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 ZNF263O14978 683 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 N4BP3O15049 544 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 TRAPPC3O43617 180 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 MICAL2O94851 1124 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 PAPSS2O95340 614 aaPredicted RBP11.54□□□□□ -0.56
CPSF1-203ENST00000527916 CD2BP2O95400 341 aaKnown RBP11.54□□□□□ -0.56
CPSF1-203ENST00000527916 CHRNB1P11230 501 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 FCARP24071 287 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 MLLT6P55198 1093 aaPredicted RBP11.54□□□□□ -0.56
CPSF1-203ENST00000527916 ATP2C1P98194 919 aaPredicted RBP11.54□□□□□ -0.56
CPSF1-203ENST00000527916 PRPF4BQ13523 1007 aaKnown RBP11.54□□□□□ -0.56
CPSF1-203ENST00000527916 IL17AQ16552 155 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 FAM78AQ5JUQ0 283 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 HYIQ5T013 277 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 CYP4A22Q5TCH4 519 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 ARL6IP4Q66PJ3 421 aaKnown RBP11.54□□□□□ -0.56
CPSF1-203ENST00000527916 HEATR6Q6AI08 1181 aaKnown RBP11.54□□□□□ -0.56
CPSF1-203ENST00000527916 ANKS3Q6ZW76 656 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 PDZD4Q76G19 769 aaPredicted RBP11.54□□□□□ -0.56
CPSF1-203ENST00000527916 MAP4K3Q8IVH8 894 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 DEPTORQ8TB45 409 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 BSNDQ8WZ55 320 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 SMARCD2Q92925 531 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 CORO1BQ9BR76 489 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 MMTAG2Q9BU76 263 aaKnown RBP11.54□□□□□ -0.56
CPSF1-203ENST00000527916 CCDC113Q9H0I3 377 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 C17orf75Q9HAS0 396 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 DDX19AQ9NUU7 478 aaKnown RBP11.54□□□□□ -0.56
CPSF1-203ENST00000527916 KCNG1Q9UIX4 513 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 SMC3Q9UQE7 1217 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 BACE2Q9Y5Z0 518 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 GREB1Q4ZG55 1949 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 MYH11P35749 1972 aa11.54□□□□□ -0.56
CPSF1-203ENST00000527916 VWA8A3KMH1 1905 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 ARHGEF37A1IGU5 675 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 H3BQV1 296 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 TM4SF5O14894 197 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 PRKCBP05771 671 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 ZNF806P0C7X5 589 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 FGFR3P22607 806 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 CCNE1P24864 410 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 SRSF5Q13243 272 aaKnown RBP11.53□□□□□ -0.56
CPSF1-203ENST00000527916 TMEM132AQ24JP5 1023 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 LARP1BQ659C4 914 aaKnown RBP11.53□□□□□ -0.56
CPSF1-203ENST00000527916 MCTP1Q6DN14 999 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 CDR2LQ86X02 465 aaPredicted RBP11.53□□□□□ -0.56
CPSF1-203ENST00000527916 ELMOD1Q8N336 334 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 ZNF461Q8TAF7 563 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 CSGALNACT1Q8TDX6 532 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 LOXL4Q96JB6 756 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 ASB16Q96NS5 453 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 ADPGKQ9BRR6 497 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 NTPCRQ9BSD7 190 aaKnown RBP11.53□□□□□ -0.56
CPSF1-203ENST00000527916 TIPINQ9BVW5 301 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 PDZD7Q9H5P4 517 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 TMEM134Q9H6X4 195 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 PHLPP2Q6ZVD8 1323 aa11.53□□□□□ -0.56
CPSF1-203ENST00000527916 TRIP11Q15643 1979 aa11.52□□□□□ -0.56
CPSF1-203ENST00000527916 WDR27A2RRH5 827 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 E9PMD0 336 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 K7ERI5 159 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 PTGESO14684 152 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 AXIN1O15169 862 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 SLC26A4O43511 780 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 B3GAT3O94766 335 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 HOXA6P31267 233 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 CUL4AQ13619 759 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms