RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TRPV5Q9NQA5 729 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 CNTN3Q9P232 1028 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 ARHGAP28Q9P2N2 729 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 MAFFQ9ULX9 164 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 DNM3Q9UQ16 869 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 STK24Q9Y6E0 443 aa17.63■□□□□ 0.41
PTPRU-210ENST00000527027 EPG5Q9HCE0 2579 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 NRG2O14511 850 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-210ENST00000527027 HIP1RO75146 1068 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 PSMC3P17980 439 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 PROZP22891 400 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 ATXN1P54253 815 aaKnown RBP17.62■□□□□ 0.41
PTPRU-210ENST00000527027 LMNB2Q03252 620 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 DMP1Q13316 513 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-210ENST00000527027 PPP2R5DQ14738 602 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 DAW1Q8N136 415 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 APPL2Q8NEU8 664 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 FBXO18Q8NFZ0 1043 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 SMARCD2Q92925 531 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 ZSWIM3Q96MP5 696 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 CHRDQ9H2X0 955 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 ZNF334Q9HCZ1 680 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-210ENST00000527027 KMT5AQ9NQR1 393 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 CEP72Q9P209 647 aa17.62■□□□□ 0.41
PTPRU-210ENST00000527027 AFF4Q9UHB7 1163 aaKnown RBP17.62■□□□□ 0.41
PTPRU-210ENST00000527027 SPTBN2O15020 2390 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 PATJQ8NI35 1801 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 E9PMD0 336 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 ABLIM1O14639 778 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 TDGF1P13385 188 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 TGM1P22735 817 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 GDI1P31150 447 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 GNL2Q13823 731 aaKnown RBP17.61■□□□□ 0.41
PTPRU-210ENST00000527027 ZNF280DQ6N043 979 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 MPZL3Q6UWV2 235 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 VITQ6UXI7 678 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 HS6ST3Q8IZP7 471 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 IGSF22Q8N9C0 903 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 LEMD2Q8NC56 503 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 SNX29Q8TEQ0 813 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 FAM3CQ92520 227 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 DRC1Q96MC2 740 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 TBC1D32Q96NH3 1257 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 LLPHQ9BRT6 129 aaKnown RBP17.61■□□□□ 0.41
PTPRU-210ENST00000527027 NTPCRQ9BSD7 190 aaKnown RBP17.61■□□□□ 0.41
PTPRU-210ENST00000527027 IER2Q9BTL4 223 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 C17orf75Q9HAS0 396 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 LMAN1LQ9HAT1 526 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 TRPV4Q9HBA0 871 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 USP18Q9UMW8 372 aa17.61■□□□□ 0.41
PTPRU-210ENST00000527027 NOL7Q9UMY1 257 aaKnown RBP17.61■□□□□ 0.41
PTPRU-210ENST00000527027 TPRP12270 2363 aaKnown RBP17.61■□□□□ 0.41
PTPRU-210ENST00000527027 MEFVO15553 781 aaPredicted RBP17.6■□□□□ 0.41
PTPRU-210ENST00000527027 MOSPD3O75425 235 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 MCM4P33991 863 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 VIPR2P41587 438 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 EPHA5P54756 1037 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 TWF1Q12792 350 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 SLC10A6Q3KNW5 377 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 RINT1Q6NUQ1 792 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 MFSD6LQ8IWD5 586 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 DEPDC1BQ8WUY9 529 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 DDX12PQ92771 950 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 ZBTB45Q96K62 511 aaPredicted RBP17.6■□□□□ 0.41
PTPRU-210ENST00000527027 RAB34Q9BZG1 259 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 GPR88Q9GZN0 384 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 GMEB2Q9UKD1 530 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 CDV3Q9UKY7 258 aaKnown RBP17.6■□□□□ 0.41
PTPRU-210ENST00000527027 PIAS3Q9Y6X2 628 aa17.6■□□□□ 0.41
PTPRU-210ENST00000527027 TRIP11Q15643 1979 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 ZNF263O14978 683 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 MYL4P12829 197 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 MARCKSP29966 332 aaPredicted RBP17.59■□□□□ 0.41
PTPRU-210ENST00000527027 CCR3P51677 355 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 MAPK7Q13164 816 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 PTGDRQ13258 359 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 NBR1Q14596 966 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 KRT79Q5XKE5 535 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 RNF19BQ6ZMZ0 732 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 C1orf186Q6ZWK4 172 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 CCDC83Q8IWF9 413 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 CELF5Q8N6W0 485 aaKnown RBP17.59■□□□□ 0.41
PTPRU-210ENST00000527027 ZSCAN18Q8TBC5 510 aaPredicted RBP17.59■□□□□ 0.41
PTPRU-210ENST00000527027 RUSC1Q9BVN2 902 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 ASAH2Q9NR71 780 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 RAB23Q9ULC3 237 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 PCDHB8Q9UN66 801 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 LIMCH1Q9UPQ0 1083 aa17.59■□□□□ 0.41
PTPRU-210ENST00000527027 SFI1A8K8P3 1242 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 SLC16A4O15374 487 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 TOM1L1O75674 476 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 HARSP12081 509 aaKnown RBP17.58■□□□□ 0.4
PTPRU-210ENST00000527027 CPB1P15086 417 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 GJA1P17302 382 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 CXCL12P48061 93 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 MLLT6P55198 1093 aaPredicted RBP17.58■□□□□ 0.4
PTPRU-210ENST00000527027 TEAD2Q15562 447 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 E2F7Q96AV8 911 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 RTKNQ9BST9 563 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 TIPINQ9BVW5 301 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms