RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 A0A1W2PQC6 194 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 TULP1O00294 542 aaPredicted RBP13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 PER2O15055 1255 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 MBTPS2O43462 519 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 B4GALT3O60512 393 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 ADRB2P07550 413 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 PPM1AP35813 382 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 AFF1P51825 1210 aaKnown RBP13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 BCAR1P56945 870 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 RBM10P98175 930 aaKnown RBP13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 CYP24A1Q07973 514 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 SURF1Q15526 300 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 SMAD2Q15796 467 aaKnown RBP13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 DUSP6Q16828 381 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 DCAF4L1Q3SXM0 396 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 NOMO2Q5JPE7 1267 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 EEF1DP3Q658K8 133 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 SPECC1LQ69YQ0 1117 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 NOTUMQ6P988 496 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 SMG8Q8ND04 991 aaKnown RBP13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 ZSWIM2Q8NEG5 633 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 VN1R2Q8NFZ6 395 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 TMC2Q8TDI7 906 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 PPP2R3CQ969Q6 453 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 PGBD4Q96DM1 585 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 PCMTD1Q96MG8 357 aaPredicted RBP13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 HAPLN2Q9GZV7 340 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 CDT1Q9H211 546 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 PDZD7Q9H5P4 517 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 NRDE2Q9H7Z3 1164 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 TLE6Q9H808 572 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 TBC1D13Q9NVG8 400 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 IMPACTQ9P2X3 320 aa13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 PUF60Q9UHX1 559 aaKnown RBP13.72□□□□□ -0.21
SSSCA1-203ENST00000526877 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 HIDE1A8MVS5 230 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 ABLIM1O14639 778 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 N4BP1O75113 896 aaKnown RBP13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 GALTP07902 379 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 ACOT2P49753 483 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 KRT17Q04695 432 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 CETN1Q12798 172 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 CLUL1Q15846 466 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 SLC27A1Q6PCB7 646 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 GLB1LQ6UWU2 654 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 TMEM173Q86WV6 379 aaPredicted RBP13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 CDR2LQ86X02 465 aaPredicted RBP13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 ZNF280BQ86YH2 543 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 GJD3Q8N144 294 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 SLC35C1Q96A29 364 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 CCDC51Q96ER9 411 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 ERGIC2Q96RQ1 377 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 FNBP1Q96RU3 617 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 RNF39Q9H2S5 420 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 RBAKQ9NYW8 714 aaPredicted RBP13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 CD207Q9UJ71 328 aa13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.71□□□□□ -0.21
SSSCA1-203ENST00000526877 C5orf42Q9H799 3197 aa13.71□□□□□ -0.22
SSSCA1-203ENST00000526877 ITIH6Q6UXX5 1313 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 CITO14578 2027 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 DDHD2O94830 711 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 TPM1P09493 284 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 CLTAP09496 248 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 GTF2H1P32780 548 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 PBX1P40424 430 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 ALDH7A1P49419 539 aaKnown RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 NDUFV1P49821 464 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 MCCD1P59942 119 aaPredicted RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 POU5F1Q01860 360 aaKnown RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 ZP2Q05996 745 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 SMAD4Q13485 552 aaKnown RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 TRIM14Q14142 442 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 PSMD6Q15008 389 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 SYCP1Q15431 976 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 PLPP4Q5VZY2 271 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 CRELD2Q6UXH1 353 aaPredicted RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 TMEM184AQ6ZMB5 413 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 PPFIBP1Q86W92 1011 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 BRSK2Q8IWQ3 736 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 MRPL43Q8N983 215 aaKnown RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 PARD3BQ8TEW8 1205 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 BCL7CQ8WUZ0 217 aaPredicted RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 CCDC127Q96BQ5 260 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 CDCA3Q99618 268 aaPredicted RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 TCF25Q9BQ70 676 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 NUP58Q9BVL2 599 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 EIF2AQ9BY44 585 aaKnown RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 TRIM6Q9C030 488 aaPredicted RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 RPF1Q9H9Y2 349 aaKnown RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 NGRNQ9NPE2 291 aaKnown RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 DNAJB4Q9UDY4 337 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 PRKAG3Q9UGI9 489 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 CPSF3Q9UKF6 684 aaKnown RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 BARX2Q9UMQ3 279 aaPredicted RBP13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 FAM50BQ9Y247 325 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 INPP5FQ9Y2H2 1132 aa13.7□□□□□ -0.22
SSSCA1-203ENST00000526877 GTPBP10A4D1E9 387 aaKnown RBP13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 PI4K2BG5E9Z4 385 aa13.69□□□□□ -0.22
SSSCA1-203ENST00000526877 INPPL1O15357 1258 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms