RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 FOSP01100 380 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 IFNA14P01570 189 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 ORC2Q13416 577 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 CCDC85BQ15834 202 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 RAD9BQ6WBX8 426 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 COPS6Q7L5N1 327 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 IFNL2Q8IZJ0 200 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 ZNF786Q8N393 782 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 AENQ8WTP8 325 aaKnown RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 MKL1Q969V6 931 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 MMTAG2Q9BU76 263 aaKnown RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 BBS2Q9BXC9 721 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 POLIQ9UNA4 740 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 PTPN22Q9Y2R2 807 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 PLEKHG1Q9ULL1 1385 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 TET3O43151 1660 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 SMCO2A6NFE2 343 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 SEC24DO94855 1032 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 CIITAP33076 1130 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 LIFRP42702 1097 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 NLRP11P59045 1033 aaKnown RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 PHC1P78364 1004 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 EXOSC10Q01780 885 aaKnown RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 CYP27A1Q02318 531 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 UBE3AQ05086 875 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 PTK2Q05397 1052 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 PTGDRQ13258 359 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 BFSP2Q13515 415 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 TRIM71Q2Q1W2 868 aaKnown RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 HP1BP3Q5SSJ5 553 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 TTC30BQ8N4P2 665 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 TTC13Q8NBP0 860 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 CLHC1Q8NHS4 586 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 ATXN2LQ8WWM7 1075 aaKnown RBP6.88□□□□□ -1.31
CTNND1-212ENST00000525902 BTBD6Q96KE9 485 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 TNIP3Q96KP6 325 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 MXD3Q9BW11 206 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 MND1Q9BWT6 205 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 IRF2BPLQ9H1B7 796 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 FAM53CQ9NYF3 392 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 CLIC5Q9NZA1 410 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 DCTN4Q9UJW0 460 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 SPATA2Q9UM82 520 aa6.88□□□□□ -1.31
CTNND1-212ENST00000525902 CDK12Q9NYV4 1490 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 FGGP02679 453 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 FBLN1P23142 703 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 NSFP46459 744 aaKnown RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 YWHAGP61981 247 aaKnown RBP eCLIP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 OTUD4Q01804 1114 aaKnown RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 GRM1Q13255 1194 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 TOP3AQ13472 1001 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 NFYCQ13952 458 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 MTERF2Q49AM1 385 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 FAM26FQ5R3K3 315 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 GARNL3Q5VVW2 1013 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 LVRNQ6Q4G3 990 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 RBM44Q6ZP01 1051 aaKnown RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 UNC13DQ70J99 1090 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 KCNK18Q7Z418 384 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 RNF135Q8IUD6 432 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 LRRC34Q8IZ02 419 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 GOLM1Q8NBJ4 401 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 NEDD1Q8NHV4 660 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 DPF2Q92785 391 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 PTPRN2Q92932 1015 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 USP13Q92995 863 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 KIFC2Q96AC6 838 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 EAF2Q96CJ1 260 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 SUCLG2Q96I99 432 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 SP140LQ9H930 580 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 KIAA1586Q9HCI6 787 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 SLC12A6Q9UHW9 1150 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 AGAP1Q9UPQ3 857 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 EFR3BQ9Y2G0 817 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 ATP7BP35670 1465 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 TTC26A0AVF1 554 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 H3BNX3 289 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 CES2O00748 559 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 PDPK1O15530 556 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 ZSCAN9O15535 394 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 PHGDHO43175 533 aaKnown RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 CDH16O75309 829 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 TRMUO75648 421 aaKnown RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 CCNKO75909 580 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 ATP5BP06576 529 aaKnown RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 THOP1P52888 689 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 SLC12A2P55011 1212 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 BPIFB4P59827 614 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 SQLEQ14534 574 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 BOLA3Q53S33 107 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 LAYNQ6UX15 382 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 ATG14Q6ZNE5 492 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 ARHGEF19Q8IW93 802 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 REXO1Q8N1G1 1221 aaKnown RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 SERPINB12Q96P63 405 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 UBA2Q9UBT2 640 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-212ENST00000525902 CYTH4Q9UIA0 394 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 DNM3Q9UQ16 869 aa6.87□□□□□ -1.31
CTNND1-212ENST00000525902 SQORQ9Y6N5 450 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms