RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ITGB3P05106 788 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CNPP09543 421 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 EPB41P11171 864 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CPB1P15086 417 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 TRIM21P19474 475 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 PTMSP20962 102 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 FGFR3P22607 806 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 TKTP29401 623 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 POLR2BP30876 1174 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 ELF1P32519 619 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 HOXD13P35453 343 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 PSMC2P35998 433 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 BRCC3P46736 316 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 RBP5P82980 135 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 LRRC63Q05C16 580 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CYP24A1Q07973 514 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 BFSP1Q12934 665 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 ADAM15Q13444 863 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 SMAD4Q13485 552 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 BIRC3Q13489 604 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 TRPC3Q13507 836 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 COL19A1Q14993 1142 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CLUL1Q15846 466 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZBTB6Q15916 424 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 NFIL3Q16649 462 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CTC1Q2NKJ3 1217 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 EDRF1Q3B7T1 1238 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 LEXMQ3ZCV2 418 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CTXN3Q4LDR2 81 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 COBLL1Q53SF7 1204 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 TJAP1Q5JTD0 557 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 RTP2Q5QGT7 225 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 KIAA0319Q5VV43 1072 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 C9orf57Q5W0N0 161 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 PTCRAQ6ISU1 281 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 PRSS55Q6UWB4 352 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CRELD2Q6UXH1 353 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 INTS8Q75QN2 995 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 SLC9A9Q8IVB4 645 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 GLYCTKQ8IVS8 523 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 FAM186BQ8IYM0 893 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 RNF168Q8IYW5 571 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 THEM5Q8N1Q8 247 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CSGALNACT2Q8N6G5 542 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 LRRC52Q8N7C0 313 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 TRIML1Q8N9V2 468 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CCDC150Q8NCX0 1101 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CCDC127Q96BQ5 260 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 DHTKD1Q96HY7 919 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 SUSD3Q96L08 255 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 B3GALT6Q96L58 329 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 FBXL18Q96ME1 805 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 RIPOR3Q96MK2 946 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 KLHL5Q96PQ7 755 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 ASB2Q96Q27 587 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 POP1Q99575 1024 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CGRRF1Q99675 332 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 VN1R3Q9BXE9 311 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 IMPG2Q9BZV3 1241 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 MTMR12Q9C0I1 747 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CXCL16Q9H2A7 254 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 KCTD10Q9H3F6 313 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 SFXN1Q9H9B4 322 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 RXFP1Q9HBX9 757 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CHST7Q9NS84 486 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 INTS13Q9NVM9 706 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 DACH1Q9UI36 760 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 MAN1B1Q9UKM7 699 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 BARX2Q9UMQ3 279 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 TRAF3IP3Q9Y228 551 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 BACE2Q9Y5Z0 518 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 HCFC2Q9Y5Z7 792 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 MYH11P35749 1972 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 KIAA1671Q9BY89 1806 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 ANO9A1A5B4 782 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 OR6C75A6NL08 312 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 KPNA7A9QM74 516 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 BIN1O00499 593 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 CYB561D2O14569 222 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 PRRG1O14668 218 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 MAPK13O15264 365 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 SLC16A3O15427 465 aaKnown RBP5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 TEX28O15482 410 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 MEFVO15553 781 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 HUS1O60921 280 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 TBX10O75333 385 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 P4HA1P13674 534 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 RPL17P18621 184 aaKnown RBP5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 TYMPP19971 482 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 OR1D2P34982 312 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 GTF2F1P35269 517 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 PRCPP42785 496 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 MTHFRP42898 656 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 CLCN4P51793 760 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 VAMP7P51809 220 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 GUCY2FP51841 1108 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 ARPP19P56211 112 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 LILRA4P59901 499 aa5.82□□□□□ -1.48
HMGB1P40-201ENST00000525121 TNNC1P63316 161 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms