RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 C8orf76Q96K31 380 aa13.95□□□□□ -0.18
SF3B2-203ENST00000524627 ZNF512Q96ME7 567 aaPredicted RBP13.95□□□□□ -0.18
SF3B2-203ENST00000524627 ACAP3Q96P50 834 aa13.95□□□□□ -0.18
SF3B2-203ENST00000524627 TCHPQ9BT92 498 aa13.95□□□□□ -0.18
SF3B2-203ENST00000524627 ZNF334Q9HCZ1 680 aaPredicted RBP13.95□□□□□ -0.18
SF3B2-203ENST00000524627 DDX19AQ9NUU7 478 aaKnown RBP13.95□□□□□ -0.18
SF3B2-203ENST00000524627 LRWD1Q9UFC0 647 aa13.95□□□□□ -0.18
SF3B2-203ENST00000524627 TICRRQ7Z2Z1 1910 aa13.95□□□□□ -0.18
SF3B2-203ENST00000524627 DCDC2BA2VCK2 349 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 CITO14578 2027 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 HIP1RO75146 1068 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 MICAL2O94851 1124 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 COL4A2P08572 1712 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 MCF2P10911 925 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 MYL4P12829 197 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 TDGF1P13385 188 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 GJA1P17302 382 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 PSMC3P17980 439 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 TGM1P22735 817 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 RPL9P32969 192 aaKnown RBP13.94□□□□□ -0.18
SF3B2-203ENST00000524627 MCM4P33991 863 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 VIPR2P41587 438 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.181e-7■■■□□ 16.1
SF3B2-203ENST00000524627 NRLP54845 237 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 MRPL58Q14197 206 aaKnown RBP13.94□□□□□ -0.18
SF3B2-203ENST00000524627 PPP2R5DQ14738 602 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 ZNF280DQ6N043 979 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 MAP4K3Q8IVH8 894 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 DAW1Q8N136 415 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 SNX29Q8TEQ0 813 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 FAM3CQ92520 227 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 SUSD3Q96L08 255 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 FOXP1Q9H334 677 aaPredicted RBP13.94□□□□□ -0.18
SF3B2-203ENST00000524627 TMEM134Q9H6X4 195 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 LMAN1LQ9HAT1 526 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 PARD6AQ9NPB6 346 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 KMT5AQ9NQR1 393 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 CEP72Q9P209 647 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 CNTN3Q9P232 1028 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 ARHGAP28Q9P2N2 729 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 RAB23Q9ULC3 237 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 PIAS3Q9Y6X2 628 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 EPG5Q9HCE0 2579 aa13.94□□□□□ -0.18
SF3B2-203ENST00000524627 E9PMD0 336 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 ABLIM1O14639 778 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 ZNF263O14978 683 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 MEFVO15553 781 aaPredicted RBP13.93□□□□□ -0.18
SF3B2-203ENST00000524627 MOSPD3O75425 235 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 CPB1P15086 417 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 CCR3P51677 355 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 GNL2Q13823 731 aaKnown RBP13.93□□□□□ -0.18
SF3B2-203ENST00000524627 MPZL3Q6UWV2 235 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 RNF19BQ6ZMZ0 732 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 PRR23BQ6ZRT6 265 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 CCDC83Q8IWF9 413 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 C4orf32Q8N8J7 132 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 APPL2Q8NEU8 664 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 ZSCAN18Q8TBC5 510 aaPredicted RBP13.93□□□□□ -0.18
SF3B2-203ENST00000524627 DDX12PQ92771 950 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 ZBTB45Q96K62 511 aaPredicted RBP13.93□□□□□ -0.18
SF3B2-203ENST00000524627 TBC1D32Q96NH3 1257 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 RUSC1Q9BVN2 902 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 SLITRK6Q9H5Y7 841 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 TRPV5Q9NQA5 729 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 ASAH2Q9NR71 780 aa13.93□□□□□ -0.18
SF3B2-203ENST00000524627 AFF4Q9UHB7 1163 aaKnown RBP13.93□□□□□ -0.18
SF3B2-203ENST00000524627 NCANO14594 1321 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 SLC16A4O15374 487 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 PROZP22891 400 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 CCNE1P24864 410 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 SATB1Q01826 763 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 SPEM2Q0P670 501 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 TEAD2Q15562 447 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 SEZ6Q53EL9 994 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 MAMSTRQ6ZN01 415 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 TMEM130Q8N3G9 435 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 DEPDC1BQ8WUY9 529 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 DRC1Q96MC2 740 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 RTKNQ9BST9 563 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 IER2Q9BTL4 223 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 ANKFY1Q9P2R3 1169 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 TUBGCP4Q9UGJ1 667 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 NOL7Q9UMY1 257 aaKnown RBP13.92□□□□□ -0.18
SF3B2-203ENST00000524627 PCDHB8Q9UN66 801 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 DNM3Q9UQ16 869 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 RBM19Q9Y4C8 960 aaKnown RBP13.92□□□□□ -0.18
SF3B2-203ENST00000524627 ACACBO00763 2458 aa13.92□□□□□ -0.18
SF3B2-203ENST00000524627 SFI1A8K8P3 1242 aa13.91□□□□□ -0.18
SF3B2-203ENST00000524627 PP2D1A8MPX8 630 aa13.91□□□□□ -0.18
SF3B2-203ENST00000524627 HEPACAM2A8MVW5 462 aa13.91□□□□□ -0.18
SF3B2-203ENST00000524627 KRT37O76014 449 aa13.91□□□□□ -0.18
SF3B2-203ENST00000524627 MARCKSP29966 332 aaPredicted RBP13.91□□□□□ -0.18
SF3B2-203ENST00000524627 TRAPPC10P48553 1259 aa13.91□□□□□ -0.18
SF3B2-203ENST00000524627 EPHA5P54756 1037 aa13.91□□□□□ -0.18
SF3B2-203ENST00000524627 MAPK7Q13164 816 aa13.91□□□□□ -0.18
SF3B2-203ENST00000524627 PDIA5Q14554 519 aa13.91□□□□□ -0.18
SF3B2-203ENST00000524627 NOLC1Q14978 699 aaKnown RBP eCLIP13.91□□□□□ -0.18
SF3B2-203ENST00000524627 SLC10A6Q3KNW5 377 aa13.91□□□□□ -0.18
SF3B2-203ENST00000524627 LAIR1Q6GTX8 287 aa13.91□□□□□ -0.18
SF3B2-203ENST00000524627 MFSD6LQ8IWD5 586 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms