RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 DRICH1Q6PGQ1 229 aaPredicted RBP4.83□□□□□ -1.64
SKP1-212ENST00000523966 APOA5Q6Q788 366 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 ZNF783Q6ZMS7 281 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 MED25Q71SY5 747 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 PPP1R3BQ86XI6 285 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 SAMD3Q8N6K7 520 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 PCSK9Q8NBP7 692 aaKnown RBP4.83□□□□□ -1.64
SKP1-212ENST00000523966 OR6B3Q8NGW1 331 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 APIPQ96GX9 242 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 NT5C1BQ96P26 610 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 MYD88Q99836 296 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 ELAC2Q9BQ52 826 aaKnown RBP4.83□□□□□ -1.64
SKP1-212ENST00000523966 APOL5Q9BWW9 433 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 LSM14BQ9BX40 385 aaKnown RBP4.83□□□□□ -1.64
SKP1-212ENST00000523966 GPR87Q9BY21 358 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.83□□□□□ -1.64
SKP1-212ENST00000523966 FAM30AQ9NZY2 134 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 TCAF1Q9Y4C2 921 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 COMMD10Q9Y6G5 202 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.83□□□□□ -1.64
SKP1-212ENST00000523966 PNPLA7Q6ZV29 1317 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 CDHR4A6H8M9 788 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 DRGXA6NNA5 263 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 FRS3O43559 492 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 PRICKLE3O43900 615 aaPredicted RBP4.82□□□□□ -1.64
SKP1-212ENST00000523966 RECQL4O94761 1208 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 AGFG2O95081 481 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 ITGB1P05556 798 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 THP07101 528 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 SBK3P0C264 359 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 RARBP10826 455 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 ZKSCAN1P17029 563 aaPredicted RBP4.82□□□□□ -1.64
SKP1-212ENST00000523966 ACO1P21399 889 aaKnown RBP4.82□□□□□ -1.64
SKP1-212ENST00000523966 MAN2A2P49641 1150 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 PLP2Q04941 152 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 EXOSC9Q06265 439 aaKnown RBP4.82□□□□□ -1.64
SKP1-212ENST00000523966 NFIXQ14938 502 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 CNGA2Q16280 664 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 CYB5RLQ6IPT4 315 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 ZNF365Q70YC5 407 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 GPRIN1Q7Z2K8 1008 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 PDSS2Q86YH6 399 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 OR52N2Q8NGI0 321 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 IL31RAQ8NI17 732 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 PARD3BQ8TEW8 1205 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 PGBD4Q96DM1 585 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 LOXL4Q96JB6 756 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 RPS6KC1Q96S38 1066 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 C22orf23Q9BZE7 217 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 BTBD1Q9H0C5 482 aa4.82□□□□□ -1.64
SKP1-212ENST00000523966 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.82□□□□□ -1.64
SKP1-212ENST00000523966 EIF2B4Q9UI10 523 aaKnown RBP4.82□□□□□ -1.64
SKP1-212ENST00000523966 BTBD11A6QL63 1104 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 ZNF785A8K8V0 405 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 WNT10BO00744 389 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 CHEK2O96017 543 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 ITGB3P05106 788 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 SPATA31D3P0C874 917 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 CKBP12277 381 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 HDCP19113 662 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 CHN2P52757 468 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 SUMO3P55854 103 aaPredicted RBP4.81□□□□□ -1.64
SKP1-212ENST00000523966 SATB1Q01826 763 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 PIGFQ07326 219 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 KIF22Q14807 665 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 LONRF1Q17RB8 773 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 EMC10Q5UCC4 262 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 SWSAP1Q6NVH7 229 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 FOXR2Q6PJQ5 311 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 SPOCD1Q6ZMY3 1216 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 SPATA31D4Q6ZUB0 917 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 FAM186BQ8IYM0 893 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 KRT78Q8N1N4 520 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 SLC17A8Q8NDX2 589 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 Q8TCH9 128 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 KBTBD7Q8WVZ9 684 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 ANKS1AQ92625 1134 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 PHKBQ93100 1093 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 DCLRE1CQ96SD1 692 aaKnown RBP4.81□□□□□ -1.64
SKP1-212ENST00000523966 TBCBQ99426 244 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 MNTQ99583 582 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 BDH2Q9BUT1 245 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 IMPG2Q9BZV3 1241 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 PNPLA8Q9NP80 782 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 NLRC4Q9NPP4 1024 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 SACM1LQ9NTJ5 587 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 FBXO34Q9NWN3 711 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 PHTF1Q9UMS5 762 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 ATP11BQ9Y2G3 1177 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 PAXBP1Q9Y5B6 917 aa4.81□□□□□ -1.64
SKP1-212ENST00000523966 USP19O94966 1318 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 PATE3B3GLJ2 98 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 DIRC3C9JPN6 131 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 K7ESM1 405 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 MATN4O95460 622 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 NPR1P16066 1061 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 HOXA5P20719 270 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 NHLH2Q02577 135 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 ZNF844Q08AG5 666 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 RAB32Q13637 225 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms