RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 POU3F3P20264 500 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 KCNA5P22460 613 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 RPL10P27635 214 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 NOVP48745 357 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 ZNF200P98182 395 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 ARHGAP1Q07960 439 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 SCRN1Q12765 414 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 GPNMBQ14956 572 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 SF1Q15637 639 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 ALX1Q15699 326 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 STXBP2Q15833 593 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 DGKDQ16760 1214 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 KIAA0753Q2KHM9 967 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 TCTN1Q2MV58 587 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 FAM209AQ5JX71 171 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 RTP2Q5QGT7 225 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 GPATCH4Q5T3I0 446 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 ARHGEF16Q5VV41 709 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 YOD1Q5VVQ6 348 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 CCDC62Q6P9F0 684 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 CNKSR3Q6P9H4 555 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 ZNF574Q6ZN55 896 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 HOMER1Q86YM7 354 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 DHX37Q8IY37 1157 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 ADGRF4Q8IZF3 695 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 FLCNQ8NFG4 579 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 NSUN6Q8TEA1 469 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 KCTD13Q8WZ19 329 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 ESR2Q92731 530 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 KAT2BQ92831 832 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 UIMC1Q96RL1 719 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 TGS1Q96RS0 853 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 CTAGE1Q96RT6 745 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 RMDN3Q96TC7 470 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 CDADC1Q9BWV3 514 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 RNF41Q9H4P4 317 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 KAT14Q9H8E8 782 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 PCMTD2Q9NV79 361 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 TMEM260Q9NX78 707 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 COL20A1Q9P218 1284 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 HDAC6Q9UBN7 1215 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 BACE2Q9Y5Z0 518 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 CHD7Q9P2D1 2997 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 SCN5AQ14524 2016 aa6.08□□□□□ -1.44
CTNNA1-239ENST00000523685 LCTP09848 1927 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 ABCB11O95342 1321 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 CCDC171Q6TFL3 1326 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 XIRP2A4UGR9 3374 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 TRBV23-1A0A0A0MS06 115 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 ABHD14A-ACY1A0A1B0GW23 586 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 TMEM82A0PJX8 343 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 LINC01553A4QN01 128 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 ZNF213O14771 459 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 GJB5O95377 273 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 WNT11O96014 354 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 SNHG28P0DPA3 235 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 L1CAMP32004 1257 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 THPOP40225 353 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 ECI1P42126 302 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 SEPHS1P49903 392 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 PDE1AP54750 535 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 GFRA1P56159 465 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 QRICH1Q2TAL8 776 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 ZNF618Q5T7W0 954 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 WFDC3Q8IUB2 231 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 MYOCDQ8IZQ8 938 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 TTC14Q96N46 770 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 RAD9AQ99638 391 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 C17orf80Q9BSJ5 609 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 DHRS4Q9BTZ2 278 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 KATNAL1Q9BW62 490 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 UBE2ZQ9H832 354 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 CD320Q9NPF0 282 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 AP5S1Q9NUS5 200 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 FANCLQ9NW38 375 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 ZNF281Q9Y2X9 895 aa6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 MRPL11Q9Y3B7 192 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-239ENST00000523685 SALL3Q9BXA9 1300 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 B4E1Z4 1266 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 H3BQ06 376 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 ENPP3O14638 875 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 DLX3O60479 287 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 CSPG5O95196 566 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 PARNO95453 639 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 GGPS1O95749 300 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 CXCL10P02778 98 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 AMHP03971 560 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 PARP1P09874 1014 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 IL9P15248 144 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 HSD3B2P26439 372 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 HOXA13P31271 388 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 ERVK-21P61565 698 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 CYP4F3Q08477 520 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 MAP4K2Q12851 820 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 EEF1DP3Q658K8 133 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 CWC27Q6UX04 472 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 ZPBP2Q6X784 338 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 SESTD1Q86VW0 696 aa6.06□□□□□ -1.44
CTNNA1-239ENST00000523685 IQCA1Q86XH1 822 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms