RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	ADSL	P30566	484 aa	Predicted RBP	5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	PTGS2	P35354	604 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	INHBE	P58166	350 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	TMPRSS15	P98073	1019 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	UGT8	Q16880	541 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	GFOD2	Q3B7J2	385 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	DGKH	Q86XP1	1220 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	SLC35B2	Q8TB61	432 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	SNX33	Q8WV41	574 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	LENG9	Q96B70	501 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	RHOBTB2	Q9BYZ6	727 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	KCNG1	Q9UIX4	513 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	NOB1	Q9ULX3	412 aa	Known RBP	5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	FZD1	Q9UP38	647 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	TNKS	O95271	1327 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	DIP2A	Q14689	1571 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	AHDC1	Q5TGY3	1603 aa	Predicted RBP	5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	KIDINS220	Q9ULH0	1771 aa		5.88	□□□□□ -1.47
SREK1-213	ENST00000523655	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	PRR5-ARHGAP8	B1AHC4	643 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	NCR1	O76036	304 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	ABHD16A	O95870	558 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	ITGB1	P05556	798 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	GYPE	P15421	78 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	ZSCAN20	P17040	1043 aa	Predicted RBP	5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	PAX3	P23760	479 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	NANOS3	P60323	173 aa	Known RBP	5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	NHLH2	Q02577	135 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	DHX8	Q14562	1220 aa	Known RBP	5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	CCDC178	Q5BJE1	867 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	PRAMEF14	Q5SWL7	426 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	CXorf57	Q6NSI4	855 aa	Known RBP	5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	KSR2	Q6VAB6	950 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	BRINP3	Q76B58	766 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	COG1	Q8WTW3	980 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	JPH3	Q8WXH2	748 aa	Predicted RBP	5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	CDC5L	Q99459	802 aa	Known RBP	5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	QRSL1	Q9H0R6	528 aa	Known RBP	5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	GPRC5D	Q9NZD1	345 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	APOBEC2	Q9Y235	224 aa	Known RBP	5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	MAP3K2	Q9Y2U5	619 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	HS3ST4	Q9Y661	456 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	PRDM15	P57071	1507 aa	Predicted RBP	5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	ARHGAP5	Q13017	1502 aa		5.87	□□□□□ -1.47
SREK1-213	ENST00000523655	KIF14	Q15058	1648 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	SETD5	Q9C0A6	1442 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	SPAG9	O60271	1321 aa	Known RBP	5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	NDUFA10	O95299	355 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	TGM1	P22735	817 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	WNT3A	P56704	352 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	SCAND1	P57086	179 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	EZH2	Q15910	746 aa	Known RBP	5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	TIGD2	Q4W5G0	525 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	KCNV1	Q6PIU1	500 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	SLC4A10	Q6U841	1118 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	LRRC55	Q6ZSA7	311 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	DOK3	Q7L591	496 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	C11orf96	Q7Z7L8	435 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	SYNE4	Q8N205	404 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	OR10H5	Q8NGA6	315 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	TSPEAR	Q8WU66	669 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	ZG16B	Q96DA0	208 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	NEU1	Q99519	415 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	ARPC5L	Q9BPX5	153 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	PDCD2L	Q9BRP1	358 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	MAF1	Q9H063	256 aa		5.86	□□□□□ -1.47
SREK1-213	ENST00000523655	ADGB	Q8N7X0	1667 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	ABCC3	O15438	1527 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	PNPLA6	Q8IY17	1366 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	GRID2IP	A4D2P6	1211 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	UNC119B	A6NIH7	251 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655		K7ESF4	209 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	TRIM24	O15164	1050 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	RECQL4	O94761	1208 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	PURA	Q00577	322 aa	Known RBP	5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	FSCN1	Q16658	493 aa	Known RBP	5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	PDCD4	Q53EL6	469 aa	Known RBP	5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	LY6G5C	Q5SRR4	150 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	GDF7	Q7Z4P5	450 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	BEND2	Q8NDZ0	799 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	PHACTR3	Q96KR7	559 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	PRRX2	Q99811	253 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	WNT8A	Q9H1J5	351 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	TCF7L1	Q9HCS4	588 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	AKIP1	Q9NQ31	210 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	DMRT3	Q9NQL9	472 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	OBP2A	Q9NY56	170 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	POGK	Q9P215	609 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	CHST2	Q9Y4C5	530 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	COL4A3	Q01955	1670 aa		5.85	□□□□□ -1.47
SREK1-213	ENST00000523655	TIAM1	Q13009	1591 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	PZP	P20742	1482 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	RALGAPB	Q86X10	1494 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	GOLGA8A	A7E2F4	631 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	TBKBP1	A7MCY6	615 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	SH3BP5	O60239	455 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	GC	P02774	474 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	TRIM27	P14373	513 aa		5.84	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms