RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 NUGGCQ68CJ6 796 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 MPZL3Q6UWV2 235 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 ZBED8Q8IZ13 594 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 ATL2Q8NHH9 583 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 DEPDC1BQ8WUY9 529 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 L2HGDHQ9H9P8 463 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 TBC1D12O60347 775 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 H2AFXP16104 143 aaPredicted RBP13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 CARSP49589 748 aaKnown RBP13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 EIF3EP60228 445 aaKnown RBP13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 CDR2Q01850 454 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 PSMD6Q15008 389 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 BTNL9Q6UXG8 535 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 CCNI2Q6ZMN8 369 aaPredicted RBP13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 SH3BP5LQ7L8J4 393 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 TRAPPC11Q7Z392 1133 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 CCDC60Q8IWA6 550 aaPredicted RBP13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 ARHGAP24Q8N264 748 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 DNAJC19Q96DA6 116 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 THOC1Q96FV9 657 aaKnown RBP13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 SNF8Q96H20 258 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 KCNH4Q9UQ05 1017 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 CYP11B1P15538 503 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 CPT1AP50416 773 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 LAMTOR4Q0VGL1 99 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 RPS6KA2Q15349 733 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 CATSPERGQ6ZRH7 1159 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 RIN2Q8WYP3 895 aaPredicted RBP13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 CPB2Q96IY4 423 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 TLK1Q9UKI8 766 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 ROBO1Q9Y6N7 1651 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 ZBBXA8MT70 800 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 RGS2P41220 211 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 RASSF2P50749 326 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 CAV1Q03135 178 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 AP1B1Q10567 949 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 PPM1NQ8N819 430 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 USP38Q8NB14 1042 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 ACSF2Q96CM8 615 aaPredicted RBP13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 PDGFDQ9GZP0 370 aaPredicted RBP13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 KIF9Q9HAQ2 790 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 RRAGCQ9HB90 399 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 OSGEPQ9NPF4 335 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 RGPD2P0DJD1 1756 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 CD4P01730 458 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 MTM1Q13496 603 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 TMC2Q8TDI7 906 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 SKA2Q8WVK7 121 aaPredicted RBP13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 TATDN2Q93075 761 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 SETD4Q9NVD3 440 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 CYP39A1Q9NYL5 469 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 ABCC6O95255 1503 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 PIK3CDO00329 1044 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 ATP9AO75110 1047 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 SNHG28P0DPA3 235 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 ADORA2AP29274 412 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 MYL6P60660 151 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 TBX2Q13207 712 aaPredicted RBP13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 STILQ15468 1287 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 BTBD8Q5XKL5 378 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 ACAD10Q6JQN1 1059 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 ZBTB45Q96K62 511 aaPredicted RBP13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 ADAM33Q9BZ11 813 aa13.81□□□□□ -0.2
PCDHGB1-201ENST00000523390 PFDN6O15212 129 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 PHF2O75151 1096 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 CCDC38Q502W7 563 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 OSMRQ99650 979 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 INTS13Q9NVM9 706 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 ROBO3Q96MS0 1386 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 CYP3A7-CYP3A51PA0A087WV96 503 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 IQANK1A0A1B0GTG1 560 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 ARHGAP42A6NI28 874 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 GMNNO75496 209 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 KRT37O76014 449 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 CYP3A7P24462 503 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 EPHB1P54762 984 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 LRRC31Q6UY01 552 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 FAM47EQ6ZV65 393 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 SLC47A2Q86VL8 602 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 C4orf32Q8N8J7 132 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 FEZF2Q8TBJ5 459 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 CGRRF1Q99675 332 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 INTUQ9ULD6 942 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 SLIT2O94813 1529 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 SH3BP5O60239 455 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 STAG3L1P0CL83 205 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 CXCL8P10145 99 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 SLC26A2P50443 739 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 CDK17Q00537 523 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 ZNF677Q86XU0 584 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 SPATS2Q86XZ4 545 aaKnown RBP13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 JAMLQ86YT9 394 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 RCOR2Q8IZ40 523 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 TTC17Q96AE7 1141 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 C9orf72Q96LT7 481 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 DPP3Q9NY33 737 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 UBA1P22314 1058 aaKnown RBP13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 ERVK-9P63128 1117 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms