RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 OSBPL8Q9BZF1 889 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 DONSONQ9NYP3 566 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 MGEA5O60502 916 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 CIITAP33076 1130 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 ERVK-9P63128 1117 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 SPDYCQ5MJ68 293 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 LRRC43Q8N309 656 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 SENP7Q9BQF6 1050 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 C5P01031 1676 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 ZSCAN5CA6NGD5 496 aaPredicted RBP14.57□□□□□ -0.08
SYNPO-205ENST00000522122 BTNL10A8MVZ5 291 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 RXRBP28702 533 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 TYK2P29597 1187 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 AP2B1P63010 937 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 WDR72Q3MJ13 1102 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 C1orf228Q6PIY5 440 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 MTMR9Q96QG7 549 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 SUDS3Q9H7L9 328 aaPredicted RBP14.57□□□□□ -0.08
SYNPO-205ENST00000522122 KLHL11Q9NVR0 708 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 DDX20Q9UHI6 824 aaKnown RBP14.57□□□□□ -0.08
SYNPO-205ENST00000522122 NEU2Q9Y3R4 380 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 DISP2A7MBM2 1401 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 F8VZ95 297 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 ZNF844Q08AG5 666 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 MAPK7Q13164 816 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 SLC29A2Q14542 456 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 RTFDC1Q9BY42 306 aaPredicted RBP14.56□□□□□ -0.08
SYNPO-205ENST00000522122 WWP1Q9H0M0 922 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 PNMA3Q9UL41 463 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 TRIM33Q9UPN9 1127 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 SPATA31A1Q5TZJ5 1347 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 CREB3O43889 395 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 RNF149Q8NC42 400 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 SCG3Q8WXD2 468 aaKnown RBP14.56□□□□□ -0.08
SYNPO-205ENST00000522122 MED15Q96RN5 788 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 RPAP3Q9H6T3 665 aaPredicted RBP14.56□□□□□ -0.08
SYNPO-205ENST00000522122 GGA2Q9UJY4 613 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 FAM47DPA6NHR8 397 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 GOLGA8RI6L899 631 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 MED24O75448 989 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 EEF1B2P24534 225 aaKnown RBP14.56□□□□□ -0.08
SYNPO-205ENST00000522122 PAPOLAP51003 745 aaKnown RBP14.56□□□□□ -0.08
SYNPO-205ENST00000522122 FOXR2Q6PJQ5 311 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 MDM1Q8TC05 714 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 BAP1Q92560 729 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 SH3GL2Q99962 352 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 CACYBPQ9HB71 228 aaKnown RBP14.56□□□□□ -0.08
SYNPO-205ENST00000522122 ALG13Q9NP73 1137 aaKnown RBP14.56□□□□□ -0.08
SYNPO-205ENST00000522122 ORC6Q9Y5N6 252 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 ZFXP17010 805 aaPredicted RBP14.56□□□□□ -0.08
SYNPO-205ENST00000522122 ADAM33Q9BZ11 813 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 EHD4Q9H223 541 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 WDR35Q9P2L0 1181 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 INPP5FQ9Y2H2 1132 aa14.56□□□□□ -0.08
SYNPO-205ENST00000522122 TMEM120BA0PK00 339 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 HNRNPCL1O60812 293 aaKnown RBP14.55□□□□□ -0.08
SYNPO-205ENST00000522122 STAT5BP51692 787 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 CCNYL1Q8N7R7 359 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 RBBP8NLQ8NC74 664 aaPredicted RBP14.55□□□□□ -0.08
SYNPO-205ENST00000522122 ALKBH8Q96BT7 664 aaKnown RBP14.55□□□□□ -0.08
SYNPO-205ENST00000522122 YIPF3Q9GZM5 350 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 NDE1Q9NXR1 346 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.55□□□□□ -0.08
SYNPO-205ENST00000522122 LCA5LO95447 670 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 NCOA4Q13772 614 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 BAATQ14032 418 aaPredicted RBP14.55□□□□□ -0.08
SYNPO-205ENST00000522122 GIT2Q14161 759 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 TTLL4Q14679 1199 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 LRRC55Q6ZSA7 311 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 LPAR1Q92633 364 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 ZSWIM1Q9BR11 485 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 TMEM8AQ9HCN3 771 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 GTPBP10A4D1E9 387 aaKnown RBP14.55□□□□□ -0.08
SYNPO-205ENST00000522122 CYTH3O43739 400 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 TMC3Q7Z5M5 1100 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 EXT2Q93063 718 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 BATF3Q9NR55 127 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 SUFUQ9UMX1 484 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 SMIM22K7EJ46 135 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 GSTA4O15217 222 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 APOEP02649 317 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 COILP38432 576 aaPredicted RBP14.55□□□□□ -0.08
SYNPO-205ENST00000522122 PHEXP78562 749 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 GPR162Q16538 588 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 LRRC34Q8IZ02 419 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 C4orf33Q8N1A6 199 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 SLC10A4Q96EP9 437 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 PPCSQ9HAB8 311 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 NOD2Q9HC29 1040 aa14.55□□□□□ -0.08
SYNPO-205ENST00000522122 EPHB6O15197 1021 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 CCND1P24385 295 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 FNTAP49354 379 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 SNRPFP62306 86 aaKnown RBP14.54□□□□□ -0.08
SYNPO-205ENST00000522122 KIF19Q2TAC6 998 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 RGS9BPQ6ZS82 235 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 BARGINQ6ZT62 677 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 FGD4Q96M96 766 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 MXRA8Q9BRK3 442 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 SUN2Q9UH99 717 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 A8MXQ7 604 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms