RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CIB2O75838 187 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 PECAM1P16284 738 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 ADRA1DP25100 572 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 TUBP50607 506 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 SLC1A5Q15758 541 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 KHDC1Q4VXA5 237 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 WDR44Q5JSH3 913 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 SYCP2LQ5T4T6 812 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 KRT39Q6A163 491 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 CTAGE3PQ8IX95 158 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 KIFC3Q9BVG8 833 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 GPRC5CQ9NQ84 441 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 GINM1Q9NU53 330 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 PRKAG3Q9UGI9 489 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 VAV3Q9UKW4 847 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 SMG5Q9UPR3 1016 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 TOGARAM1Q9Y4F4 1720 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 SLC26A4O43511 780 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 BANF1O75531 89 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 ETS1P14921 441 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 THOC5Q13769 683 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 FASTKD3Q14CZ7 662 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 CYP1B1Q16678 543 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 ACAD10Q6JQN1 1059 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 SYDE1Q6ZW31 735 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 CENPUQ71F23 418 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 OTOP1Q7RTM1 612 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 TAS1R2Q8TE23 839 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 KREMEN1Q96MU8 473 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 ANKFY1Q9P2R3 1169 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 FRMPD4Q14CM0 1322 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 CCDC160A6NGH7 325 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 IPO5O00410 1097 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 TXNDC9O14530 226 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 LIN7AO14910 233 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 AHCYL1O43865 530 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 OPHN1O60890 802 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 GH2P01242 217 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 GM2AP17900 193 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 YARSP54577 528 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 LRRC36Q1X8D7 754 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 EAPPQ56P03 285 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 XKR9Q5GH70 373 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 CDC42EP5Q6NZY7 148 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 DSTYKQ6XUX3 929 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 OTOAQ7RTW8 1153 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 USP37Q86T82 979 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 TRABD2AQ86V40 505 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 ZNF75CPQ92670 426 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 INPP5DQ92835 1189 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 LENG9Q96B70 501 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 RILPQ96NA2 401 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 FNBP1Q96RU3 617 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 WDR11Q9BZH6 1224 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 POLLQ9UGP5 575 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 ARAP2Q8WZ64 1704 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 TMEM150BA6NC51 233 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 EDF1O60869 148 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 HARSP12081 509 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 WASHC2DQ5SRD0 308 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 RHOT1Q8IXI2 618 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 ARHGAP24Q8N264 748 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 ZNF526Q8TF50 670 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 HSD17B14Q9BPX1 270 aa13.57□□□□□ -0.24
TRAPPC9-208ENST00000520857 WFS1O76024 890 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 MT-ND3P03897 115 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 ARP10275 920 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 PGM1P36871 562 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 CACNA2D1P54289 1103 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 GABPAQ06546 454 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 SNRNP35Q16560 246 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.56□□□□□ -0.242e-6■■■■■ 122.8
TRAPPC9-208ENST00000520857 FBXL13Q8NEE6 735 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 HOMER2Q9NSB8 354 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 ARMCX1Q9P291 453 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 ADGRA3Q8IWK6 1321 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 ARHGAP42A6NI28 874 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 TLR3O15455 904 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 SORBS3O60504 671 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 ZWINTO95229 277 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 KITP10721 976 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 CEP55Q53EZ4 464 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 PPP1R14CQ8TAE6 165 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 ASAP3Q8TDY4 903 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 SYT11Q9BT88 431 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 WDR18Q9BV38 432 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 FHDC1Q9C0D6 1143 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 UNC45AQ9H3U1 944 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
TRAPPC9-208ENST00000520857 SP100P23497 879 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 RANBP1P43487 201 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 KDSRQ06136 332 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 SIX1Q15475 284 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 ATP13A4Q4VNC1 1196 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 ANKRD27Q96NW4 1050 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 HERPUD2Q9BSE4 406 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 FBXO6Q9NRD1 293 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 PPARGC1AQ9UBK2 798 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms