RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 CSPG5O95196 566 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 KLRC2P26717 231 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 ITIH3Q06033 890 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 SMAD4Q13485 552 aaKnown RBP17.64■□□□□ 0.41
TNPO1-212ENST00000520850 TPRNQ4KMQ1 711 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 LILRA6Q6PI73 481 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 ELMSAN1Q6PJG2 1045 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 CYP26C1Q6V0L0 522 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 APPL2Q8NEU8 664 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 RIN2Q8WYP3 895 aaPredicted RBP17.64■□□□□ 0.41
TNPO1-212ENST00000520850 FAM212AQ96EL1 285 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 SAAL1Q96ER3 474 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 S1PR5Q9H228 398 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 PLEKHA4Q9H4M7 779 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 PCIF1Q9H4Z3 704 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 DPP3Q9NY33 737 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 PRKAG3Q9UGI9 489 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 NUB1Q9Y5A7 615 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 ANK1P16157 1881 aa17.64■□□□□ 0.41
TNPO1-212ENST00000520850 ARHGEF37A1IGU5 675 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 MAPK13O15264 365 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 TBC1D4O60343 1298 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 GADD45BO75293 160 aaPredicted RBP17.63■□□□□ 0.41
TNPO1-212ENST00000520850 PRPF40AO75400 957 aaKnown RBP17.63■□□□□ 0.41
TNPO1-212ENST00000520850 NFICP08651 508 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 IGFBP6P24592 240 aaPredicted RBP17.63■□□□□ 0.41
TNPO1-212ENST00000520850 LILRA4P59901 499 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 MCCD1P59942 119 aaPredicted RBP17.63■□□□□ 0.41
TNPO1-212ENST00000520850 SPAG1Q07617 926 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 SMAD2Q15796 467 aaKnown RBP17.63■□□□□ 0.41
TNPO1-212ENST00000520850 SNRNP35Q16560 246 aaKnown RBP17.63■□□□□ 0.41
TNPO1-212ENST00000520850 C9orf57Q5W0N0 161 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 PTCRAQ6ISU1 281 aaPredicted RBP17.63■□□□□ 0.41
TNPO1-212ENST00000520850 NELFCDQ8IXH7 590 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 ZSWIM2Q8NEG5 633 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 CMASQ8NFW8 434 aaPredicted RBP17.63■□□□□ 0.41
TNPO1-212ENST00000520850 HASPINQ8TF76 798 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 MFSD14AQ96MC6 490 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 CLSTN3Q9BQT9 956 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 MTRRQ9UBK8 725 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 PCDHA5Q9Y5H7 936 aa17.63■□□□□ 0.41
TNPO1-212ENST00000520850 H3BQ06 376 aaPredicted RBP17.62■□□□□ 0.41
TNPO1-212ENST00000520850 H7C4K7 107 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 C2CD2LO14523 706 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 MBTPS2O43462 519 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 OAZ2O95190 189 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 TYMPP19971 482 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 PNPLA4P41247 253 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 BRCC3P46736 316 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 ENPEPQ07075 957 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 PNOCQ13519 176 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 RAB33AQ14088 237 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 PSMD5Q16401 504 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 ZNF658Q5TYW1 1059 aaPredicted RBP17.62■□□□□ 0.41
TNPO1-212ENST00000520850 SLC8B1Q6J4K2 584 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 SYCE2Q6PIF2 218 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 EFCAB13Q8IY85 973 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 SUSD6Q92537 303 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 ADAM7Q9H2U9 754 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 MAFFQ9ULX9 164 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 PCDHB8Q9UN66 801 aa17.62■□□□□ 0.41
TNPO1-212ENST00000520850 GOLGA8IPA6NC78 632 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 GOLGA8JA6NMD2 632 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 CLIC2O15247 247 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 CALUO43852 315 aaPredicted RBP17.61■□□□□ 0.41
TNPO1-212ENST00000520850 GLUD1P00367 558 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 MCM4P33991 863 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 CA8P35219 290 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 PPP1R2P41236 205 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 KCNQ1P51787 676 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 CLDN10P78369 228 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 PSMD6Q15008 389 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 DUOXA2Q1HG44 320 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 EP400NLQ6ZTU2 488 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 CEP57Q86XR8 500 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 CBWD2Q8IUF1 395 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 WDR49Q8IV35 697 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 CXorf38Q8TB03 319 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 SMARCE1Q969G3 411 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 B3GALT6Q96L58 329 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 PDE11AQ9HCR9 933 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 INTS13Q9NVM9 706 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 ITGA11Q9UKX5 1188 aa17.61■□□□□ 0.41
TNPO1-212ENST00000520850 BARX2Q9UMQ3 279 aaPredicted RBP17.61■□□□□ 0.41
TNPO1-212ENST00000520850 VWA8A3KMH1 1905 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 VCANP13611 3396 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 CYP11A1P05108 521 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 EPCAMP16422 314 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 RPL13P26373 211 aaKnown RBP17.6■□□□□ 0.41
TNPO1-212ENST00000520850 TKTP29401 623 aaKnown RBP17.6■□□□□ 0.41
TNPO1-212ENST00000520850 AP3M2P53677 418 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 WNT7BP56706 349 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 CYP24A1Q07973 514 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 UVSSAQ2YD98 709 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 EDRF1Q3B7T1 1238 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 VARS2Q5ST30 1063 aaKnown RBP17.6■□□□□ 0.41
TNPO1-212ENST00000520850 FOXR2Q6PJQ5 311 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 PRSS55Q6UWB4 352 aaPredicted RBP17.6■□□□□ 0.41
TNPO1-212ENST00000520850 C15orf39Q6ZRI6 1047 aa17.6■□□□□ 0.41
TNPO1-212ENST00000520850 LRRC52Q8N7C0 313 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms