RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 FTHL17Q9BXU8 183 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 STK33Q9BYT3 514 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 GPR88Q9GZN0 384 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 XYLT2Q9H1B5 865 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 TSPYL2Q9H2G4 693 aaPredicted RBP9.18□□□□□ -0.94
VAPB-206ENST00000520497 LUC7LQ9NQ29 371 aaKnown RBP9.18□□□□□ -0.94
VAPB-206ENST00000520497 RGS18Q9NS28 235 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 AIPL1Q9NZN9 384 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 SIX4Q9UIU6 781 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 DNAJC12Q9UKB3 198 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 ITGA11Q9UKX5 1188 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 ATP11BQ9Y2G3 1177 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 NR2E3Q9Y5X4 410 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 SMIM28A0A1B0GU29 152 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 MEIS3P2A8K0S8 358 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 C9IYK1 514 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 F8VZ95 297 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 PTGESO14684 152 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 INPPL1O15357 1258 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 CST3P01034 146 aaPredicted RBP9.17□□□□□ -0.94
VAPB-206ENST00000520497 CCDC172P0C7W6 258 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 SKIP12755 728 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 ITGA4P13612 1032 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 MYL6P60660 151 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 NOP14P78316 857 aaKnown RBP9.17□□□□□ -0.94
VAPB-206ENST00000520497 DRAP1Q14919 205 aaPredicted RBP9.17□□□□□ -0.94
VAPB-206ENST00000520497 HGSNATQ68CP4 663 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 ECHDC2Q86YB7 292 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 HACE1Q8IYU2 909 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 CCAR2Q8N163 923 aaKnown RBP9.17□□□□□ -0.94
VAPB-206ENST00000520497 GSTCDQ8NEC7 633 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 SHC3Q92529 594 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 APBB2Q92870 758 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 KAT5Q92993 513 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 TATDN2Q93075 761 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 VWCEQ96DN2 955 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 KIF12Q96FN5 646 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 FAM81BQ96LP2 452 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 KREMEN1Q96MU8 473 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 PPP1R10Q96QC0 940 aaKnown RBP9.17□□□□□ -0.94
VAPB-206ENST00000520497 GDF15Q99988 308 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 PI4K2AQ9BTU6 479 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 APOL6Q9BWW8 343 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 VRTNQ9H8Y1 702 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 APOBEC3GQ9HC16 384 aaKnown RBP9.17□□□□□ -0.94
VAPB-206ENST00000520497 RRAGDQ9NQL2 400 aaPredicted RBP9.17□□□□□ -0.94
VAPB-206ENST00000520497 PARP2Q9UGN5 583 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 GIT1Q9Y2X7 761 aa9.17□□□□□ -0.94
VAPB-206ENST00000520497 ANO9A1A5B4 782 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 KIAA0355O15063 1070 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 PHACTR2O75167 634 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 STAU1O95793 577 aaKnown RBP9.16□□□□□ -0.94
VAPB-206ENST00000520497 ITGB3P05106 788 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 CYP3A5P20815 502 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 CYP2C18P33260 490 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 PRKCIP41743 596 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 MAGEA10P43363 369 aaPredicted RBP9.16□□□□□ -0.94
VAPB-206ENST00000520497 GUCY2FP51841 1108 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 MFAP3P55082 362 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 KRT83P78385 493 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 FAM189BP81408 668 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 RAPGEF1Q13905 1077 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 PTPN14Q15678 1187 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 NAB2Q15742 525 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 TCTN1Q2MV58 587 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 SGSM1Q2NKQ1 1148 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 WDR44Q5JSH3 913 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 GLRA4Q5JXX5 417 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 SFMBT2Q5VUG0 894 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 SMYD5Q6GMV2 418 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 SPOPLQ6IQ16 392 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 SLC24A5Q71RS6 500 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 ENOSF1Q7L5Y1 443 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 CCDC170Q8IYT3 715 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 TMEM130Q8N3G9 435 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 PPM1KQ8N3J5 372 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 UBR7Q8N806 425 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 DBF4BQ8NFT6 615 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 TAF4BQ92750 862 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 LPPQ93052 612 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 JAKMIP2Q96AA8 810 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 ELMO3Q96BJ8 720 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 SCLYQ96I15 445 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 FAXDC2Q96IV6 333 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 ZFP42Q96MM3 310 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 SPAG5Q96R06 1193 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 CHP1Q99653 195 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 PPP1R12CQ9BZL4 782 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 IMPG2Q9BZV3 1241 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 DEF6Q9H4E7 631 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 RSAD1Q9HA92 442 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 UBE2TQ9NPD8 197 aaPredicted RBP9.16□□□□□ -0.94
VAPB-206ENST00000520497 C1orf112Q9NSG2 853 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 TMEM39AQ9NV64 488 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 DPP3Q9NY33 737 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 KLK14Q9P0G3 267 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 ARHGAP20Q9P2F6 1191 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 TUBGCP4Q9UGJ1 667 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 UBQLN1Q9UMX0 589 aaKnown RBP9.16□□□□□ -0.94
VAPB-206ENST00000520497 NUB1Q9Y5A7 615 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms