RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PPM1KQ8N3J5 372 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 TATDN2Q93075 761 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 PADI3Q9ULW8 664 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 ATP8B3O60423 1300 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 BTNL10A8MVZ5 291 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 CLTAP09496 248 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 SELPP16109 830 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 IBSPP21815 317 aaPredicted RBP15.57■□□□□ 0.08
CLN8-204ENST00000519254 MFAP3P55082 362 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 RBM10P98175 930 aaKnown RBP15.57■□□□□ 0.08
CLN8-204ENST00000519254 ELF2Q15723 593 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 TDRD10Q5VZ19 366 aaKnown RBP15.57■□□□□ 0.08
CLN8-204ENST00000519254 TRAF7Q6Q0C0 670 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 ANKRD33Q7Z3H0 272 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 GLYCTKQ8IVS8 523 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 FAM71AQ8IYT1 594 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 SHC3Q92529 594 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 ELMO3Q96BJ8 720 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 NT5C1BQ96P26 610 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 NOX5Q96PH1 765 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 CGRRF1Q99675 332 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 NXF3Q9H4D5 531 aaKnown RBP15.57■□□□□ 0.08
CLN8-204ENST00000519254 ERVK-5Q9HDB9 667 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 UMODL1Q5DID0 1318 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 EFCAB8A8MWE9 144 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 BUB1O43683 1085 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 VNN1O95497 513 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 MBTPS1Q14703 1052 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 UBXN11Q5T124 520 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 NECAB2Q7Z6G3 386 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 ACAP3Q96P50 834 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 PI4K2AQ9BTU6 479 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 CCDC94Q9BW85 323 aaPredicted RBP15.56■□□□□ 0.08
CLN8-204ENST00000519254 PPP1R12CQ9BZL4 782 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 SNTG2Q9NY99 539 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 JRKLQ9Y4A0 524 aa15.56■□□□□ 0.08
CLN8-204ENST00000519254 ZC3H11AO75152 810 aaKnown RBP eCLIP15.55■□□□□ 0.08
CLN8-204ENST00000519254 HLA-DRAP01903 254 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 ZSCAN20P17040 1043 aaPredicted RBP15.55■□□□□ 0.08
CLN8-204ENST00000519254 GRM5P41594 1212 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 FAAP100Q0VG06 881 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 KYAT1Q16773 422 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 WHAMMP3Q1A5X7 153 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 LRRC26Q2I0M4 334 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 RSRC2Q7L4I2 434 aaKnown RBP15.55■□□□□ 0.08
CLN8-204ENST00000519254 SLC20A1Q8WUM9 679 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 AGPAT1Q99943 283 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 HIPK3Q9H422 1215 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 INTUQ9ULD6 942 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 SAR1BQ9Y6B6 198 aa15.55■□□□□ 0.08
CLN8-204ENST00000519254 H2AFZP0C0S5 128 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 EN2P19622 333 aaPredicted RBP15.54■□□□□ 0.08
CLN8-204ENST00000519254 TNFAIP3P21580 790 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 AKAP5P24588 427 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 TFAMQ00059 246 aaKnown RBP15.54■□□□□ 0.08
CLN8-204ENST00000519254 BIRC3Q13489 604 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 H2AFVQ71UI9 128 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 USP38Q8NB14 1042 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 OR5B17Q8NGF7 314 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 TOX2Q96NM4 488 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 ALS2CR12Q96Q35 445 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 KIAA0100Q14667 2235 aaKnown RBP15.54■□□□□ 0.08
CLN8-204ENST00000519254 LACTBL1A8MY62 500 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 MEFVO15553 781 aaPredicted RBP15.54■□□□□ 0.08
CLN8-204ENST00000519254 MGEA5O60502 916 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 SRGAP2O75044 1071 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 CLSTN1O94985 981 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 IL18RAPO95256 599 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 USP8P40818 1118 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 YARSP54577 528 aaKnown RBP15.54■□□□□ 0.08
CLN8-204ENST00000519254 CCL23P55773 120 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 GCNT1Q02742 428 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 SLC10A6Q3KNW5 377 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 C1orf53Q5VUE5 145 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 PALB2Q86YC2 1186 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 CEP112Q8N8E3 955 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 SCLYQ96I15 445 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 CHST12Q9NRB3 414 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 PARP2Q9UGN5 583 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 PUF60Q9UHX1 559 aaKnown RBP15.54■□□□□ 0.08
CLN8-204ENST00000519254 NOCTQ9UK39 431 aaKnown RBP15.54■□□□□ 0.08
CLN8-204ENST00000519254 IPPQ9Y573 584 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 PCDHB2Q9Y5E7 798 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 PCDHGC5Q9Y5F6 944 aa15.54■□□□□ 0.08
CLN8-204ENST00000519254 CYP26A1O43174 497 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 RECQL4O94761 1208 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 NFICP08651 508 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 CHRNB2P17787 502 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 CYP2C18P33260 490 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 PIK3CAP42336 1068 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 GALCP54803 685 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 NAP1L1P55209 391 aaKnown RBP15.53■□□□□ 0.08
CLN8-204ENST00000519254 SURF1Q15526 300 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 SCARA3Q6AZY7 606 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 JADE1Q6IE81 842 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 NOP9Q86U38 636 aaKnown RBP15.53■□□□□ 0.08
CLN8-204ENST00000519254 WDR49Q8IV35 697 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 EFCAB13Q8IY85 973 aa15.53■□□□□ 0.08
CLN8-204ENST00000519254 SMG8Q8ND04 991 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms