RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 PPP1R2P3Q6NXS1 205 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 GLYCTKQ8IVS8 523 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 RPUSD2Q8IZ73 545 aaKnown RBP16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 TTC39CQ8N584 583 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 FAM84AQ96KN4 292 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 CALR3Q96L12 384 aaKnown RBP16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 NAPGQ99747 312 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 WBP1LQ9NX94 342 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 DPP3Q9NY33 737 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 NOCTQ9UK39 431 aaKnown RBP16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 UBQLN1Q9UMX0 589 aaKnown RBP16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 ST3GAL5Q9UNP4 418 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 A0A0A6YYK5 440 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 MEFVO15553 781 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 RECQL4O94761 1208 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 ITGB3P05106 788 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 CTSHP09668 335 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 ACO1P21399 889 aaKnown RBP16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 XKR4Q5GH76 650 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 ALKAL1Q6UXT8 129 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 TRIM72Q6ZMU5 477 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 FAM43BQ6ZT52 329 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 NOP9Q86U38 636 aaKnown RBP16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 SLC35F6Q8N357 371 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 UBR7Q8N806 425 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 SH3TC2Q8TF17 1288 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 WNT8BQ93098 351 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 NOX5Q96PH1 765 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 WDR24Q96S15 920 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 XYLT2Q9H1B5 865 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 NXF3Q9H4D5 531 aaKnown RBP16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 CYP3A43Q9HB55 503 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 ERVK-5Q9HDB9 667 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 SEPT11Q9NVA2 429 aaKnown RBP16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 TRIM10Q9UDY6 481 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 SIX4Q9UIU6 781 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 TSKSQ9UJT2 592 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 IPPQ9Y573 584 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 MYH10P35580 1976 aa16.14■□□□□ 0.17
TRAPPC9-205ENST00000518839 ANO9A1A5B4 782 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 MACROD2A1Z1Q3 448 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 ARVCFO00192 962 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 RTN2O75298 545 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 CD4P01730 458 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 TMEM253P0C7T8 217 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 KCNE1P15382 129 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 CYP3A5P20815 502 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 RAB27AP51159 221 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 MYO1EQ12965 1108 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 PAK2Q13177 524 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 ZBTB6Q15916 424 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 TRIM71Q2Q1W2 868 aaKnown RBP16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 FBXO47Q5MNV8 452 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 SLC47A2Q86VL8 602 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 RBBP8NLQ8NC74 664 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 OLIG1Q8TAK6 271 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 SLC20A1Q8WUM9 679 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 CTNNBL1Q8WYA6 563 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 IRX2Q9BZI1 471 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 UNC93B1Q9H1C4 597 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 PAK6Q9NQU5 681 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 PARP2Q9UGN5 583 aa16.13■□□□□ 0.17
TRAPPC9-205ENST00000518839 ANKRD62A6NC57 917 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 TLR3O15455 904 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 URI1O94763 535 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 ABL1P00519 1130 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 SKIP12755 728 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 ATF7P17544 494 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 POLR2BP30876 1174 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 NFX1Q12986 1120 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 TMEM270Q6UE05 265 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 LRRC52Q8N7C0 313 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 CXorf38Q8TB03 319 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 CAGE1Q8TC20 777 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 HPDLQ96IR7 371 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 ARID3AQ99856 593 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 TRAIPQ9BWF2 469 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 BCO2Q9BYV7 579 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 ISCUQ9H1K1 167 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 L2HGDHQ9H9P8 463 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 TRMT13Q9NUP7 481 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 FAM105AQ9NUU6 356 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 TFR2Q9UP52 801 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 AGAP1Q9UPQ3 857 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 UMODL1Q5DID0 1318 aa16.12■□□□□ 0.17
TRAPPC9-205ENST00000518839 CHRNB2P17787 502 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 GNA15P30679 374 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 ASPAP45381 313 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 ZNF132P52740 706 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 GALCP54803 685 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 NAP1L1P55209 391 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 TNNC1P63316 161 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 FMO1Q01740 532 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 WDR72Q3MJ13 1102 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 SMG8Q8ND04 991 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 DDX1Q92499 740 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 ZNF560Q96MR9 790 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 APOL6Q9BWW8 343 aa16.11■□□□□ 0.17
TRAPPC9-205ENST00000518839 PACSIN1Q9BY11 444 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms