RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 ECE1P42892 770 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KCNJ4P48050 445 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NDUFV1P49821 464 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NR0B1P51843 470 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ID2Q02363 134 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TEFQ10587 303 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KCNAB2Q13303 367 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GRB10Q13322 594 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MRPL49Q13405 166 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PWP2Q15269 919 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SF3B3Q15393 1217 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CYP2A13Q16696 494 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 UGP2Q16851 508 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DPY19L1Q2PZI1 675 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SLC4A8Q2Y0W8 1093 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TMEM30BQ3MIR4 351 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TCTEX1D4Q5JR98 221 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF776Q68DI1 518 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KRT39Q6A163 491 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FSTL4Q6MZW2 842 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SMIM29Q86T20 159 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LRRTM1Q86UE6 522 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CHSY1Q86X52 802 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KIF18BQ86Y91 864 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 WWC1Q8IX03 1113 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 COLGALT2Q8IYK4 626 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CAMKK1Q8N5S9 505 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 WDR48Q8TAF3 677 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PIP4K2CQ8TBX8 421 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TBC1D5Q92609 795 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DPF2Q92785 391 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 COPS5Q92905 334 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF428Q96B54 188 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF845Q96IR2 970 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SLC46A1Q96NT5 459 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FOXN4Q96NZ1 517 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PKP4Q99569 1192 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SDHCQ99643 169 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 BARD1Q99728 777 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ACO2Q99798 780 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EBF4Q9BQW3 602 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SLC25A33Q9BSK2 321 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SEZ6LQ9BYH1 1024 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CDT1Q9H211 546 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EPC1Q9H2F5 836 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 C14orf93Q9H972 538 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SEMA4BQ9NPR2 832 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KLHL11Q9NVR0 708 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FAM30AQ9NZY2 134 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PI4KBQ9UBF8 816 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DENND2AQ9ULE3 1009 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SLC6A5Q9Y345 797 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ADAM18Q9Y3Q7 739 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TELO2Q9Y4R8 837 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 COL5A1P20908 1838 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ABCA7Q8IZY2 2146 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TRGV11A0A075B6L2 103 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PLSCR5A0PG75 271 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 WDR27A2RRH5 827 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CLEC18AA5D8T8 446 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PRKNO60260 465 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 B4GALT2O60909 372 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 VAMP4O75379 141 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 USP1O94782 785 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MPIG6BO95866 241 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SYF2O95926 243 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CFBP00751 764 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SNRNP70P08621 437 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ARP10275 920 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HSP90B1P14625 803 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HOXB2P14652 356 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MGMTP16455 207 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 AOAHP28039 575 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ALDH4A1P30038 563 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HOXA11P31270 313 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CDKN1AP38936 164 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KIR2DL3P43628 341 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CRKP46108 304 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PMS1P54277 932 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EWSR1Q01844 656 aaKnown RBP eCLIP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF91Q05481 1191 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FPGSQ05932 587 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KIF5AQ12840 1032 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LSAMPQ13449 338 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KCNJ12Q14500 433 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RFTN1Q14699 578 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PPP2R5DQ14738 602 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CNGA3Q16281 694 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PRTGQ2VWP7 1150 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ANO6Q4KMQ2 910 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 INO80DQ53TQ3 878 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PRAMEF19Q5SWL8 479 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 AXDND1Q5T1B0 1012 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HDGFL1Q5TGJ6 251 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TTLL5Q6EMB2 1281 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ASPHD2Q6ICH7 369 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF813Q6ZN06 617 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 Q6ZS52 159 aa-0.38□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KCTD1Q719H9 257 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms