RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 GBP6Q6ZN66 633 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 ZNF280BQ86YH2 543 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 CREBRFQ8IUR6 639 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 NAP1L5Q96NT1 182 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 FAM124BQ9H5Z6 455 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 NRDE2Q9H7Z3 1164 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 RAB20Q9NX57 234 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 TSC2P49815 1807 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 B4GALT3O60512 393 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 EFEMP2O95967 443 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 ASS1P00966 412 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 HLA-DRAP01903 254 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 ITGB3P05106 788 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 FAM163BP0C2L3 166 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 LINC00271P0C7V0 271 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 PBX1P40424 430 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 AARSP49588 968 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 BIRC3Q13489 604 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 BTG3Q14201 252 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 GSE1Q14687 1217 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 EXOC3L4Q17RC7 722 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 SGSM1Q2NKQ1 1148 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 DCLRE1AQ6PJP8 1040 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 EHBP1Q8NDI1 1231 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 TAS1R2Q8TE23 839 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 MRFAP1L1Q96HT8 127 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 ZNF560Q96MR9 790 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 FAM193BQ96PV7 902 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 YME1L1Q96TA2 773 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 ZBED2Q9BTP6 218 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 XYLT2Q9H1B5 865 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 PLCB1Q9NQ66 1216 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 GDAP2Q9NXN4 497 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 FBXL5Q9UKA1 691 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 SIK3Q9Y2K2 1263 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 PCDHA11Q9Y5I1 949 aa12.9□□□□□ -0.34
PDLIM5-220ENST00000514830 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 PODXLO00592 558 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 AP5Z1O43299 807 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 TLL1O43897 1013 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 PHACTR2O75167 634 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 CST3P01034 146 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 ALDH2P05091 517 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 GALTP07902 379 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 LAG3P18627 525 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 RFX1P22670 979 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 MRE11P49959 708 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 CLCNKBP51801 687 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 UBXN1Q04323 297 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 MYO1EQ12965 1108 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 TRPC3Q13507 836 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 DPY19L2P1Q6NXN4 242 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 TRIM65Q6PJ69 517 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 CD300LGQ6UXG3 332 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 TMCO2Q7Z6W1 182 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 FIBCD1Q8N539 461 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 SEMA4DQ92854 862 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 IQCDQ96DY2 449 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 FAM81BQ96LP2 452 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 IMPG2Q9BZV3 1241 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 XPO4Q9C0E2 1151 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 GRPEL1Q9HAV7 217 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 IFNKQ9P0W0 207 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 GCNT4Q9P109 453 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 DNAJB4Q9UDY4 337 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 STK39Q9UEW8 545 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 RWDD3Q9Y3V2 267 aa12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 MRPL42Q9Y6G3 142 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-220ENST00000514830 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 VWA8A3KMH1 1905 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 LAMA3Q16787 3333 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 TEX33O43247 280 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 IBSPP21815 317 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 PON1P27169 355 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 PIK3CAP42336 1068 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 TAF6P49848 677 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 GUCY2FP51841 1108 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 LILRA4P59901 499 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 MYL6P60660 151 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 GCNT1Q02742 428 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 KCNMA1Q12791 1236 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 SV2CQ496J9 727 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 PAN2Q504Q3 1202 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 FIGNQ5HY92 759 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 DPH6Q7L8W6 267 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 SPATA18Q8TC71 538 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 JAKMIP2Q96AA8 810 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 HPDLQ96IR7 371 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 FAM84AQ96KN4 292 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 COLEC11Q9BWP8 271 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 COL25A1Q9BXS0 654 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 INTS2Q9H0H0 1204 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 GOLGA2P5Q9HBQ8 144 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 SIX2Q9NPC8 291 aa12.88□□□□□ -0.35
PDLIM5-220ENST00000514830 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms