RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 SMC1AQ14683 1233 aaKnown RBP16.68■□□□□ 0.26
MATR3-239ENST00000514694 EDRF1Q3B7T1 1238 aa16.68■□□□□ 0.26
MATR3-239ENST00000514694 TTI2Q6NXR4 508 aa16.68■□□□□ 0.26
MATR3-239ENST00000514694 PRSS55Q6UWB4 352 aaPredicted RBP16.68■□□□□ 0.26
MATR3-239ENST00000514694 RBM43Q6ZSC3 357 aaKnown RBP16.68■□□□□ 0.26
MATR3-239ENST00000514694 ZC3H3Q8IXZ2 948 aaKnown RBP16.68■□□□□ 0.26
MATR3-239ENST00000514694 TRIML1Q8N9V2 468 aa16.68■□□□□ 0.26
MATR3-239ENST00000514694 VN1R2Q8NFZ6 395 aa16.68■□□□□ 0.26
MATR3-239ENST00000514694 PARD3BQ8TEW8 1205 aa16.68■□□□□ 0.26
MATR3-239ENST00000514694 NELFBQ8WX92 580 aa16.68■□□□□ 0.26
MATR3-239ENST00000514694 DHTKD1Q96HY7 919 aaPredicted RBP16.68■□□□□ 0.26
MATR3-239ENST00000514694 CTNND2Q9UQB3 1225 aa16.68■□□□□ 0.26
MATR3-239ENST00000514694 LRRIQ3A6PVS8 624 aaPredicted RBP16.67■□□□□ 0.26
MATR3-239ENST00000514694 PSMA7O14818 248 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 XPOTO43592 962 aaKnown RBP16.67■□□□□ 0.26
MATR3-239ENST00000514694 MBD3O95983 291 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 ITGB3P05106 788 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 CNPP09543 421 aaKnown RBP16.67■□□□□ 0.26
MATR3-239ENST00000514694 FGFR3P22607 806 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 CCNE1P24864 410 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
MATR3-239ENST00000514694 GLUD2P49448 558 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 AARSP49588 968 aaKnown RBP eCLIP16.67■□□□□ 0.26
MATR3-239ENST00000514694 STX17P56962 302 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 COL19A1Q14993 1142 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 USP41Q3LFD5 358 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 DPCR1Q3MIW9 517 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 NT5DC4Q86YG4 428 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 WDR49Q8IV35 697 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 RIN2Q8WYP3 895 aaPredicted RBP16.67■□□□□ 0.26
MATR3-239ENST00000514694 BORCS6Q96GS4 357 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 CGRRF1Q99675 332 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 GTPBP4Q9BZE4 634 aaKnown RBP16.67■□□□□ 0.26
MATR3-239ENST00000514694 IGFLR1Q9H665 355 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 TLE6Q9H808 572 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 TMEM63CQ9P1W3 806 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 IRAK3Q9Y616 596 aa16.67■□□□□ 0.26
MATR3-239ENST00000514694 ADAM12O43184 909 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 URODP06132 367 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 RPL17P18621 184 aaKnown RBP16.66■□□□□ 0.26
MATR3-239ENST00000514694 CA8P35219 290 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 LILRA4P59901 499 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 CLDN10P78369 228 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 LRRC63Q05C16 580 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 DLX2Q07687 328 aaPredicted RBP16.66■□□□□ 0.26
MATR3-239ENST00000514694 DUSP6Q16828 381 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 PDE12Q6L8Q7 609 aaKnown RBP16.66■□□□□ 0.26
MATR3-239ENST00000514694 CEP57Q86XR8 500 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 LNX1Q8TBB1 728 aaPredicted RBP16.66■□□□□ 0.26
MATR3-239ENST00000514694 SUSD3Q96L08 255 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 TTPALQ9BTX7 342 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 MRPL17Q9NRX2 175 aaKnown RBP16.66■□□□□ 0.26
MATR3-239ENST00000514694 NUB1Q9Y5A7 615 aa16.66■□□□□ 0.26
MATR3-239ENST00000514694 TEX28O15482 410 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 CLASP2O75122 1294 aaKnown RBP16.65■□□□□ 0.26
MATR3-239ENST00000514694 GLP2RO95838 553 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 TMEM191BP0C7N4 346 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 TRIM49P0CI25 452 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 TRIM49CP0CI26 452 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 TNNI1P19237 187 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 RPL13P26373 211 aaKnown RBP16.65■□□□□ 0.26
MATR3-239ENST00000514694 PSMC2P35998 433 aaKnown RBP16.65■□□□□ 0.26
MATR3-239ENST00000514694 LTBRP36941 435 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 PAK1Q13153 545 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 STIM1Q13586 685 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 KCNC3Q14003 757 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 SKIV2LQ15477 1246 aaKnown RBP16.65■□□□□ 0.26
MATR3-239ENST00000514694 SURF1Q15526 300 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 DUOXA2Q1HG44 320 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 CTC1Q2NKJ3 1217 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 KIAA1841Q6NSI8 718 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 RSPO2Q6UXX9 243 aaPredicted RBP16.65■□□□□ 0.26
MATR3-239ENST00000514694 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.65■□□□□ 0.26
MATR3-239ENST00000514694 FAM186BQ8IYM0 893 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 CSGALNACT2Q8N6G5 542 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 KLHL5Q96PQ7 755 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 FNBP1Q96RU3 617 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 TSG101Q99816 390 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 RXFP1Q9HBX9 757 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 AGAP1Q9UPQ3 857 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 FRMD4BQ9Y2L6 1034 aa16.65■□□□□ 0.26
MATR3-239ENST00000514694 TIMM13Q9Y5L4 95 aaPredicted RBP16.65■□□□□ 0.26
MATR3-239ENST00000514694 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.65■□□□□ 0.26
MATR3-239ENST00000514694 M0QZQ0 153 aa16.64■□□□□ 0.25
MATR3-239ENST00000514694 CETN3O15182 167 aa16.64■□□□□ 0.25
MATR3-239ENST00000514694 MAPK13O15264 365 aa16.64■□□□□ 0.25
MATR3-239ENST00000514694 SLC34A2O95436 690 aa16.64■□□□□ 0.25
MATR3-239ENST00000514694 CST3P01034 146 aaPredicted RBP16.64■□□□□ 0.25
MATR3-239ENST00000514694 FKBP3Q00688 224 aaKnown RBP16.64■□□□□ 0.25
MATR3-239ENST00000514694 ELAVL2Q12926 359 aaKnown RBP16.64■□□□□ 0.25
MATR3-239ENST00000514694 TDRD10Q5VZ19 366 aaKnown RBP16.64■□□□□ 0.25
MATR3-239ENST00000514694 TRAPPC11Q7Z392 1133 aa16.64■□□□□ 0.25
MATR3-239ENST00000514694 CACTINQ8WUQ7 758 aaKnown RBP16.64■□□□□ 0.25
MATR3-239ENST00000514694 PIK3R5Q8WYR1 880 aa16.64■□□□□ 0.25
MATR3-239ENST00000514694 ELMO3Q96BJ8 720 aa16.64■□□□□ 0.25
MATR3-239ENST00000514694 STK39Q9UEW8 545 aa16.64■□□□□ 0.25
MATR3-239ENST00000514694 ITGA11Q9UKX5 1188 aa16.64■□□□□ 0.25
MATR3-239ENST00000514694 VWA8A3KMH1 1905 aa16.64■□□□□ 0.25
MATR3-239ENST00000514694 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
MATR3-239ENST00000514694 TBX10O75333 385 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms