RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 AEBP2Q6ZN18 517 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 SLC47A2Q86VL8 602 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 NIM1KQ8IY84 436 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 RIBC1Q8N443 379 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 PRPF31Q8WWY3 499 aaKnown RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 POLR3FQ9H1D9 316 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 ASNSD1Q9NWL6 643 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 WHRNQ9P202 907 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 AGO2Q9UKV8 859 aaKnown RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 PNMA3Q9UL41 463 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 SHOX2O60902 331 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 LDHAP00338 332 aaKnown RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 TBXAS1P24557 533 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 PAPOLAP51003 745 aaKnown RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 STX3Q13277 289 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 FAM102AQ5T9C2 384 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 CCNYL1Q8N7R7 359 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 RPS6KC1Q96S38 1066 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 DCLRE1BQ9H816 532 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 KIAA1586Q9HCI6 787 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 TBC1D22BQ9NU19 505 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 FANCGO15287 622 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 KCNN4O15554 427 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 TYK2P29597 1187 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 PSMC5P62195 406 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 DNAL1Q4LDG9 190 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 VGLL2Q8N8G2 317 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 KRT35Q92764 455 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 SLC5A5Q92911 643 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 CBWD1Q9BRT8 395 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 STRIP2Q9ULQ0 834 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 TRIM33Q9UPN9 1127 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 M0QYV0 167 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 NEMP1O14524 444 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 GEMIN4P57678 1058 aaKnown RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 OCRLQ01968 901 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 ITPK1Q13572 414 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 LRRC55Q6ZSA7 311 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 ALKBH8Q96BT7 664 aaKnown RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 PGM2Q96G03 612 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 INPP4AQ96PE3 977 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 CYP26B1Q9NR63 512 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 CNOT7Q9UIV1 285 aaKnown RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 CES2O00748 559 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 WEE2P0C1S8 567 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 RARAP10276 462 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ATP6V1B1P15313 513 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 SMARCA1P28370 1054 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 CNGA1P29973 690 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 CENPCQ03188 943 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 SLC12A1Q13621 1099 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ACCSLQ4AC99 568 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 RARS2Q5T160 578 aaKnown RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 DAB2IPQ5VWQ8 1189 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ACAD10Q6JQN1 1059 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 SDCCAG3Q96C92 435 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 CCDC138Q96M89 665 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 POP1Q99575 1024 aaKnown RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 UPF3AQ9H1J1 476 aaKnown RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 MYLK2Q9H1R3 596 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 RPF1Q9H9Y2 349 aaKnown RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ZC3H7BQ9UGR2 993 aaKnown RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 SALL4Q9UJQ4 1053 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 AKT3Q9Y243 479 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 GOLGA8QA0A0J9YX86 632 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 GOLGA8OA6NCC3 632 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 MAGEA13PA6NCF6 341 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ZBBXA8MT70 800 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 GOLGA8NF8WBI6 632 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 SNX3O60493 162 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ATP9AO75110 1047 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 KRT3P12035 628 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ACADSP16219 412 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 TAL1P17542 331 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 NFX1Q12986 1120 aaKnown RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 CHI3L2Q15782 390 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 LDHDQ86WU2 507 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 GALNT4Q8N4A0 578 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 RBBP8NLQ8NC74 664 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ARHGAP10A1A4S6 786 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 TTC36A6NLP5 189 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 DCDC2CA8MYV0 355 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 CST8O60676 142 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 OSBPP22059 807 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 RSBN1LQ6PCB5 846 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ACAD11Q709F0 780 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 RYBPQ8N488 228 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 EXT2Q93063 718 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 GTSE1Q9NYZ3 720 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 PCDHB2Q9Y5E7 798 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ADCY3O60266 1144 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 MYL2P10916 166 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 SESN2P58004 480 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 PRPSAP1Q14558 356 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 CBWD2Q8IUF1 395 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 SULF1Q8IWU6 871 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 DHX38Q92620 1227 aaKnown RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 SLC35C1Q96A29 364 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 DRC3Q9H069 523 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 RHBDL2Q9NX52 303 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms