RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 KCTD5Q9NXV2 234 aa4.89□□□□□ -1.63
ATP2C1-220ENST00000513636 KCNE5Q9UJ90 142 aa4.89□□□□□ -1.63
ATP2C1-220ENST00000513636 UNC13BO14795 1591 aa4.89□□□□□ -1.63
ATP2C1-220ENST00000513636 PTPRKQ15262 1439 aa4.89□□□□□ -1.63
ATP2C1-220ENST00000513636 COL3A1P02461 1466 aaPredicted RBP4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 MLH3Q9UHC1 1453 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 DUOX2Q9NRD8 1548 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 LPLP06858 475 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 ATP5JP18859 108 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 UBXN2BQ14CS0 331 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 GJC2Q5T442 439 aaPredicted RBP4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 SMC1BQ8NDV3 1235 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 OR2W6PQ8NHA6 318 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 SH3TC2Q8TF17 1288 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 C8orf37Q96NL8 207 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 FEZ1Q99689 392 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 C1QTNF7Q9BXJ2 289 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 KCTD10Q9H3F6 313 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 MS4A5Q9H3V2 200 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 SPTLC3Q9NUV7 552 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 ARPP21Q9UBL0 812 aaPredicted RBP4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 ZC3H13Q5T200 1668 aaKnown RBP4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 AATKQ6ZMQ8 1374 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 FER1L4A9Z1Z3 1794 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 HFM1A2PYH4 1435 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 RTEL1-TNFRSF6BF6WH68 1400 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 MAGI2Q86UL8 1455 aa4.88□□□□□ -1.63
ATP2C1-220ENST00000513636 CFAP65Q6ZU64 1925 aaKnown RBP4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 PRDM15P57071 1507 aaPredicted RBP4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 IQGAP3Q86VI3 1631 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 MROH1Q8NDA8 1641 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 TRGV11A0A075B6L2 103 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 CCDC151A5D8V7 595 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 ADCY6O43306 1168 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 IL2RBP14784 551 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 ECHS1P30084 290 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 EXOSC10Q01780 885 aaKnown RBP4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 BMS1Q14692 1282 aaKnown RBP4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 SF3A1Q15459 793 aaKnown RBP4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 TCEA2Q15560 299 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 EZH2Q15910 746 aaKnown RBP4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 UGT8Q16880 541 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 CT83Q5H943 113 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 ZNF572Q7Z3I7 529 aaPredicted RBP4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 LRRTM3Q86VH5 581 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 LYSMD2Q8IV50 215 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 FUBP1Q96AE4 644 aaKnown RBP4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 ROCK1Q13464 1354 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 KIF15Q9NS87 1388 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 NAIPQ13075 1403 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 YEATS2Q9ULM3 1422 aa4.87□□□□□ -1.63
ATP2C1-220ENST00000513636 FOLR3P41439 243 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 LSSP48449 732 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 HNRNPMP52272 730 aaKnown RBP eCLIP4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 VAV2P52735 878 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 CDK17Q00537 523 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 SP140Q13342 867 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 CYP2A13Q16696 494 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 PITRM1Q5JRX3 1037 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 BROXQ5VW32 411 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 AFMIDQ63HM1 303 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 KAZNQ674X7 775 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 C1QL2Q7Z5L3 287 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 SLC41A1Q8IVJ1 513 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 C9orf106Q8NAJ2 232 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 GPR156Q8NFN8 814 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 FBXO18Q8NFZ0 1043 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 OR7D4Q8NG98 312 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 SENP6Q9GZR1 1112 aaPredicted RBP4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 UNKLQ9H9P5 680 aaKnown RBP4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 BCO1Q9HAY6 547 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 ZNF70Q9UC06 446 aaPredicted RBP4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 ZBTB21Q9ULJ3 1066 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 SPAG9O60271 1321 aaKnown RBP4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 PNPLA7Q6ZV29 1317 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 ANKRD30AQ9BXX3 1397 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 NCOA1Q15788 1441 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 ERBINQ96RT1 1412 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 KDM5DQ9BY66 1539 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 TET3O43151 1660 aa4.86□□□□□ -1.63
ATP2C1-220ENST00000513636 FKBP9O95302 570 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 BMP15O95972 392 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 CKBP12277 381 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 HOXB6P17509 224 aaKnown RBP4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 POU3F2P20265 443 aaPredicted RBP4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 GCSHP23434 173 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 C21orf62-AS1Q17RA5 79 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 MST1LQ2TV78 715 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 TSTD2Q5T7W7 516 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 ZNF425Q6IV72 752 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 FKBP9P1Q75LS8 142 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 TRMT2AQ8IZ69 625 aaKnown RBP4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 PPM1KQ8N3J5 372 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 LNX2Q8N448 690 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 Q8N9P0 234 aaPredicted RBP4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 HASPINQ8TF76 798 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 RIN2Q8WYP3 895 aaPredicted RBP4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 DDB2Q92466 427 aa4.85□□□□□ -1.63
ATP2C1-220ENST00000513636 BRIP1Q9BX63 1249 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms