RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 CACNG4Q9UBN1 327 aa10.77□□□□□ -0.69
CCL28-203ENST00000513525 KCNG1Q9UIX4 513 aa10.77□□□□□ -0.69
CCL28-203ENST00000513525 FBXO2Q9UK22 296 aaPredicted RBP10.77□□□□□ -0.69
CCL28-203ENST00000513525 GDAQ9Y2T3 454 aa10.77□□□□□ -0.69
CCL28-203ENST00000513525 SRPRBQ9Y5M8 271 aaKnown RBP10.77□□□□□ -0.69
CCL28-203ENST00000513525 CCDC195A0A1B0GUA6 201 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 VWA3AA6NCI4 1184 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 CCDC169A6NNP5 214 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 TGM5O43548 720 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 ADCY5O95622 1261 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 PROZP22891 400 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 GRM5P41594 1212 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 SLC12A3P55017 1021 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 ZNF568Q3ZCX4 644 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 TMEM119Q4V9L6 283 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 XKR4Q5GH76 650 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 PDXDC1Q6P996 788 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 SPIRE2Q8WWL2 714 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 RABGGTAQ92696 567 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 KCNN1Q92952 543 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 UROC1Q96N76 676 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 PRRX2Q99811 253 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 TTPALQ9BTX7 342 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 WDR6Q9NNW5 1121 aaKnown RBP10.76□□□□□ -0.69
CCL28-203ENST00000513525 TOPORSQ9NS56 1045 aaPredicted RBP10.76□□□□□ -0.69
CCL28-203ENST00000513525 FAM13BQ9NYF5 915 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 USP25Q9UHP3 1055 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 HOOK1Q9UJC3 728 aaKnown RBP10.76□□□□□ -0.69
CCL28-203ENST00000513525 TSC2P49815 1807 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 CACNA1HO95180 2353 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 CLUHO75153 1309 aa10.76□□□□□ -0.69
CCL28-203ENST00000513525 ABLIM1O14639 778 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 RFPL2O75678 378 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 MCF2P10911 925 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 PLS3P13797 630 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 ZRSR1Q15695 479 aaKnown RBP10.75□□□□□ -0.69
CCL28-203ENST00000513525 FAM171A1Q5VUB5 890 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 ALKAL1Q6UXT8 129 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 CEP57L1Q8IYX8 460 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 CEP120Q8N960 986 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 LNX1Q8TBB1 728 aaPredicted RBP10.75□□□□□ -0.69
CCL28-203ENST00000513525 HASPINQ8TF76 798 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 STAMQ92783 540 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 ZNF707Q96C28 371 aaPredicted RBP10.75□□□□□ -0.69
CCL28-203ENST00000513525 CDK5RAP3Q96JB5 506 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 CCDC94Q9BW85 323 aaPredicted RBP10.75□□□□□ -0.69
CCL28-203ENST00000513525 DNAJC25Q9H1X3 360 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 LIMD1Q9UGP4 676 aa10.75□□□□□ -0.69
CCL28-203ENST00000513525 SLC16A4O15374 487 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 TPM3P06753 285 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 ASGR2P07307 311 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 RPL17P18621 184 aaKnown RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 FGFR3P22607 806 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 SMTNP53814 917 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 YARSP54577 528 aaKnown RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 NHLH1Q02575 133 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 PSMD5Q16401 504 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 UPP1Q16831 310 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 GLRA4Q5JXX5 417 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 DCLRE1AQ6PJP8 1040 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 PRSS55Q6UWB4 352 aaPredicted RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 MPZL3Q6UWV2 235 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 PALB2Q86YC2 1186 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 GLYCTKQ8IVS8 523 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 TMEM161BQ8NDZ6 487 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 SMG7Q92540 1137 aaKnown RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 BPIFA3Q9BQP9 254 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 CLSTN3Q9BQT9 956 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 TARS2Q9BW92 718 aaKnown RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 FBXW11Q9UKB1 542 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 KCNH3Q9ULD8 1083 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 ODF2LQ9ULJ1 636 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 SCN1AP35498 2009 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 FANCMQ8IYD8 2048 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 DENND4CQ5VZ89 1909 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 SMIM28A0A1B0GU29 152 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 SFI1A8K8P3 1242 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 H0YCG3 227 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 N4BP1O75113 896 aaKnown RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 TOM1L1O75674 476 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 ZMYND10O75800 440 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 PTMAP06454 111 aaKnown RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 PLA2G4BP0C869 781 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 SPATA31D3P0C874 917 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 CLCN1P35523 988 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 LONP1P36776 959 aaKnown RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 CLCNKBP51801 687 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 NCKAP1LP55160 1127 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 NLRP12P59046 1061 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 STRN3Q13033 797 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 IQCB1Q15051 598 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 SARM1Q6SZW1 724 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 CD300LGQ6UXG3 332 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 ZPBP2Q6X784 338 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 KRBA2Q6ZNG9 492 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 SPATA31D4Q6ZUB0 917 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 LUZP1Q86V48 1076 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 CEP57Q86XR8 500 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 PRSS33Q8NF86 280 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms