RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 MRPL42Q9Y6G3 142 aaKnown RBP8.21□□□□□ -1.1
HMGXB3-204ENST00000513318 LINC01553A4QN01 128 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 LRRIQ3A6PVS8 624 aaPredicted RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 SMTNL1A8MU46 457 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 DDHD2O94830 711 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 TNNC2P02585 160 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 LINC00271P0C7V0 271 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 DLATP10515 647 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 DNAJB2P25686 324 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 LRPAP1P30533 357 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 PPM1AP35813 382 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 ALDH7A1P49419 539 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 VAMP7P51809 220 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 AP3M2P53677 418 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 MCCD1P59942 119 aaPredicted RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 CLDN10P78369 228 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 TFAMQ00059 246 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 SOX4Q06945 474 aaPredicted RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 SPAG1Q07617 926 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 ZBTB6Q15916 424 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 DCAF17Q5H9S7 520 aaPredicted RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 SPOUT1Q5T280 376 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 TCERG1LQ5VWI1 586 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 PPP2R2DQ66LE6 453 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 ZNF280BQ86YH2 543 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 COLGALT2Q8IYK4 626 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 AOPEPQ8N6M6 819 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 FAM200AQ8TCP9 573 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 CCDC127Q96BQ5 260 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 BORCS6Q96GS4 357 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 CNOT6LQ96LI5 555 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 ZNF558Q96NG5 402 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 MTMR12Q9C0I1 747 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 TSPY26PQ9H489 355 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 AAASQ9NRG9 546 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 INTS13Q9NVM9 706 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 HCSTQ9UBK5 93 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 DNAJB4Q9UDY4 337 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 TUBGCP4Q9UGJ1 667 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 ITGA11Q9UKX5 1188 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 YBX2Q9Y2T7 364 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 ZNF638Q14966 1978 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 PTPRJQ12913 1337 aa8.2□□□□□ -1.1
HMGXB3-204ENST00000513318 TMEM265A0A087WTH1 108 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 CASTOR2A6NHX0 329 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 GOLGA8CPA6NN73 597 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 BECN2A8MW95 431 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 C5orf67F2Z3F1 127 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 TMEM189-UBE2V1I3L0A0 370 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 STX10O60499 249 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 B4GALT3O60512 393 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 ITGB3P05106 788 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 TRIM49P0CI25 452 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 TRIM49CP0CI26 452 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 MYOGP15173 224 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 EEF1GP26641 437 aaKnown RBP8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 RPL9P32969 192 aaKnown RBP8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 CTNNB1P35222 781 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 OR1G1P47890 313 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 MXI1P50539 228 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 BCAR1P56945 870 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 DLG4P78352 724 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 NCAPHQ15003 741 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 DUOXA2Q1HG44 320 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 CDKAL1Q5VV42 579 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 LMBRD2Q68DH5 695 aaPredicted RBP8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 KCNT2Q6UVM3 1135 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 TRIM59Q8IWR1 403 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 COLGALT1Q8NBJ5 622 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 PLEKHO2Q8TD55 490 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 WNT2BQ93097 391 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 SLC35C1Q96A29 364 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 C18orf25Q96B23 403 aaPredicted RBP8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 TIFAQ96CG3 184 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 KCTD12Q96CX2 325 aaKnown RBP8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 ZNF560Q96MR9 790 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 TGS1Q96RS0 853 aaKnown RBP8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 PLVAPQ9BX97 442 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 NKX2-4Q9H2Z4 354 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 SLC28A3Q9HAS3 691 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 GOLGA2P5Q9HBQ8 144 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 TMEM8AQ9HCN3 771 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 SAMSN1Q9NSI8 373 aaKnown RBP8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 DPP3Q9NY33 737 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 CHD7Q9P2D1 2997 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 MAGEC2Q9UBF1 373 aaPredicted RBP8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 FAN1Q9Y2M0 1017 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 PCDHB12Q9Y5F1 795 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 PRRC2BQ5JSZ5 2229 aaKnown RBP8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 GREB1Q4ZG55 1949 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 DENND4CQ5VZ89 1909 aa8.19□□□□□ -1.1
HMGXB3-204ENST00000513318 ANO9A1A5B4 782 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 KCNJ18B7U540 433 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 PODXLO00592 558 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 NRP1O14786 923 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 N4BP1O75113 896 aaKnown RBP8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 ARHGEF15O94989 841 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 ALDH2P05091 517 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 RB1P06400 928 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 GALTP07902 379 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms