RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 STC2O76061 302 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 GYPEP15421 78 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 CASRP41180 1078 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 ATP8B2P98198 1209 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 CRHR2Q13324 411 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 CLUL1Q15846 466 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 FAM214AQ32MH5 1076 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 Q6ZRM9 215 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 HTR3DQ70Z44 454 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 TRMT2AQ8IZ69 625 aaKnown RBP4.87□□□□□ -1.63
NUP54-212ENST00000513248 IL17DQ8TAD2 202 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 CACTINQ8WUQ7 758 aaKnown RBP4.87□□□□□ -1.63
NUP54-212ENST00000513248 ZNF480Q8WV37 535 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 DDX17Q92841 729 aaKnown RBP4.87□□□□□ -1.63
NUP54-212ENST00000513248 DMRTA2Q96SC8 542 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 SPATA31A6Q5VVP1 1343 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 DCCP43146 1447 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 ADGRL3Q9HAR2 1447 aa4.87□□□□□ -1.63
NUP54-212ENST00000513248 ALKQ9UM73 1620 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 CHD2O14647 1828 aaKnown RBP4.86□□□□□ -1.63
NUP54-212ENST00000513248 ADCY6O43306 1168 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 XPOTO43592 962 aaKnown RBP4.86□□□□□ -1.63
NUP54-212ENST00000513248 AKR1B10O60218 316 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 IPO13O94829 963 aaKnown RBP4.86□□□□□ -1.63
NUP54-212ENST00000513248 GNAT2P19087 354 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 SCNN1GP51170 649 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 DUSP2Q05923 314 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 RRP1BQ14684 758 aaKnown RBP4.86□□□□□ -1.63
NUP54-212ENST00000513248 MFSD14BQ5SR56 506 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 C1QL3Q5VWW1 255 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 ZNF572Q7Z3I7 529 aaPredicted RBP4.86□□□□□ -1.63
NUP54-212ENST00000513248 PNMA8AQ86V59 439 aaPredicted RBP4.86□□□□□ -1.63
NUP54-212ENST00000513248 ELOA2Q8IYF1 753 aaPredicted RBP4.86□□□□□ -1.63
NUP54-212ENST00000513248 MB21D1Q8N884 522 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 MDGA1Q8NFP4 955 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 OR5M3Q8NGP4 307 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 DPF2Q92785 391 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 PDCD2LQ9BRP1 358 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 ADI1Q9BV57 179 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 LSM14BQ9BX40 385 aaKnown RBP4.86□□□□□ -1.63
NUP54-212ENST00000513248 SLC12A5Q9H2X9 1139 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 ANKRD6Q9Y2G4 727 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 LUC7L2Q9Y383 392 aaKnown RBP4.86□□□□□ -1.63
NUP54-212ENST00000513248 PHLPP1O60346 1717 aa4.86□□□□□ -1.63
NUP54-212ENST00000513248 A0A087X1B8 175 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 FAM171A2A8MVW0 826 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 PPM1GO15355 546 aaPredicted RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 MFAP3LO75121 409 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 SNUPNO95149 360 aaKnown RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 AMY1AP04745 511 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 POU2F2P09086 479 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 C1SP09871 688 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 ALOX15P16050 662 aaPredicted RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 TGM1P22735 817 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 AKAP5P24588 427 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 ADSLP30566 484 aaPredicted RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 MAN2A2P49641 1150 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 GZMKP49863 264 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 RABGGTBP53611 331 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 DGCR2P98153 550 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 DSC2Q02487 901 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 CNGB1Q14028 1251 aaPredicted RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 ACAP2Q15057 778 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 C3orf36Q3SXR2 165 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 FAM47AQ5JRC9 791 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 RRP12Q5JTH9 1297 aaKnown RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 METTL24Q5JXM2 366 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 PRAMEF14Q5SWL7 426 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 ZNF772Q68DY9 489 aaPredicted RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 DOK3Q7L591 496 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 APBB1IPQ7Z5R6 666 aaPredicted RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 TMPRSS6Q8IU80 811 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 GSPT2Q8IYD1 628 aaKnown RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 PPM1NQ8N819 430 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 ATXN2LQ8WWM7 1075 aaKnown RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 CASKIN2Q8WXE0 1202 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 ST8SIA2Q92186 375 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 HSPBAP1Q96EW2 488 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 IL17RAQ96F46 866 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 CEP95Q96GE4 821 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 PLEKHG4BQ96PX9 1271 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 PRAM1Q96QH2 718 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 GPR87Q9BY21 358 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 EPC1Q9H2F5 836 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 ZNF703Q9H7S9 590 aaPredicted RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 PNMA8BQ9ULN7 279 aaPredicted RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 PCDHB1Q9Y5F3 818 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 NPHP3Q7Z494 1330 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 LRPPRCP42704 1394 aaKnown RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 MST1RQ04912 1400 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 PTCH1Q13635 1447 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 SPATA31E1Q6ZUB1 1445 aa4.85□□□□□ -1.63
NUP54-212ENST00000513248 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.85□□□□□ -1.63
NUP54-212ENST00000513248 XIRP1Q702N8 1843 aaKnown RBP4.84□□□□□ -1.63
NUP54-212ENST00000513248 XRN1Q8IZH2 1706 aaKnown RBP4.84□□□□□ -1.63
NUP54-212ENST00000513248 NRXN3Q9Y4C0 1643 aa4.84□□□□□ -1.63
NUP54-212ENST00000513248 ASXL1Q8IXJ9 1541 aa4.84□□□□□ -1.63
NUP54-212ENST00000513248 YTHDC2Q9H6S0 1430 aaKnown RBP4.84□□□□□ -1.63
NUP54-212ENST00000513248 ABCC11Q96J66 1382 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms