RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 PTPRJQ12913 1337 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 GRM6O15303 877 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 AKAP3O75969 853 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 KIF4AO95239 1232 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 IGFBP6P24592 240 aaPredicted RBP17.81■□□□□ 0.44
HMGCL-209ENST00000513148 POU5F1Q01860 360 aaKnown RBP17.81■□□□□ 0.44
HMGCL-209ENST00000513148 PTPN14Q15678 1187 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 NFIL3Q16649 462 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 FNBP1Q96RU3 617 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 POP1Q99575 1024 aaKnown RBP17.81■□□□□ 0.44
HMGCL-209ENST00000513148 FEZ2Q9UHY8 353 aaPredicted RBP17.81■□□□□ 0.44
HMGCL-209ENST00000513148 C2CD2Q9Y426 696 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 BICDL2A1A5D9 508 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 PODXLO00592 558 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 CETN3O15182 167 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 XPOTO43592 962 aaKnown RBP17.8■□□□□ 0.44
HMGCL-209ENST00000513148 MYBPC2Q14324 1141 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 ZBTB6Q15916 424 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 TEX35Q5T0J7 233 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 TTI2Q6NXR4 508 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 FBXO38Q6PIJ6 1188 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 BEST2Q8NFU1 509 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 MTMR12Q9C0I1 747 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.8■□□□□ 0.44
HMGCL-209ENST00000513148 DERAQ9Y315 318 aa17.8■□□□□ 0.44
HMGCL-209ENST00000513148 LPXNO60711 386 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 B3GAT3O94766 335 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 TNNI1P19237 187 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 IGFBP4P22692 258 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 DNAJB1P25685 340 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 FKBP3Q00688 224 aaKnown RBP17.79■□□□□ 0.44
HMGCL-209ENST00000513148 KRT17Q04695 432 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 PSMD6Q15008 389 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 UPP1Q16831 310 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 FAM186BQ8IYM0 893 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 TXLNBQ8N3L3 684 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 C3orf58Q8NDZ4 430 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 PLEKHO2Q8TD55 490 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 TMEM174Q8WUU8 243 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 POF1BQ8WVV4 589 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 MYLIPQ8WY64 445 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 MRFAP1L1Q96HT8 127 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 MFSD14AQ96MC6 490 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 UROC1Q96N76 676 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 DUSP9Q99956 384 aaKnown RBP17.79■□□□□ 0.44
HMGCL-209ENST00000513148 COLEC11Q9BWP8 271 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 ATG2AQ2TAZ0 1938 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 TADA2AO75478 443 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 TMEM191BP0C7N4 346 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 PSMC2P35998 433 aaKnown RBP17.79■□□□□ 0.44
HMGCL-209ENST00000513148 SPATA1Q5VX52 437 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 SPPL3Q8TCT6 385 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 GUCD1Q96NT3 240 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 CDX2Q99626 313 aaPredicted RBP17.79■□□□□ 0.44
HMGCL-209ENST00000513148 L2HGDHQ9H9P8 463 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 CBX8Q9HC52 389 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 DPP3Q9NY33 737 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 ADAM28Q9UKQ2 775 aa17.79■□□□□ 0.44
HMGCL-209ENST00000513148 PPEF2O14830 753 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 CA8P35219 290 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 HNRNPH2P55795 449 aaKnown RBP17.78■□□□□ 0.44
HMGCL-209ENST00000513148 DLG4P78352 724 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 PLCB3Q01970 1234 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 ADGRE1Q14246 886 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 LRRC8AQ8IWT6 810 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 DRC7Q8IY82 874 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 CSGALNACT2Q8N6G5 542 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 OR5B17Q8NGF7 314 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 TSPAN18Q96SJ8 248 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 GAS2L1Q99501 681 aaPredicted RBP17.78■□□□□ 0.44
HMGCL-209ENST00000513148 VN1R3Q9BXE9 311 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 TRIM5Q9C035 493 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 MTMR10Q9NXD2 777 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 DACH1Q9UI36 760 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 RWDD2AQ9UIY3 292 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 REV3LO60673 3130 aa17.78■□□□□ 0.44
HMGCL-209ENST00000513148 CARNS1A5YM72 827 aa17.77■□□□□ 0.44
HMGCL-209ENST00000513148 EPB41P11171 864 aaKnown RBP17.77■□□□□ 0.44
HMGCL-209ENST00000513148 CYP3A5P20815 502 aa17.77■□□□□ 0.44
HMGCL-209ENST00000513148 LRMPQ12912 555 aa17.77■□□□□ 0.44
HMGCL-209ENST00000513148 SURF1Q15526 300 aa17.77■□□□□ 0.44
HMGCL-209ENST00000513148 WDR49Q8IV35 697 aa17.77■□□□□ 0.44
HMGCL-209ENST00000513148 CACTINQ8WUQ7 758 aaKnown RBP17.77■□□□□ 0.44
HMGCL-209ENST00000513148 DDX27Q96GQ7 796 aaKnown RBP17.77■□□□□ 0.44
HMGCL-209ENST00000513148 ANKRD36BP1Q96IX9 119 aa17.77■□□□□ 0.44
HMGCL-209ENST00000513148 CGRRF1Q99675 332 aa17.77■□□□□ 0.44
HMGCL-209ENST00000513148 INTS13Q9NVM9 706 aa17.77■□□□□ 0.44
HMGCL-209ENST00000513148 PUF60Q9UHX1 559 aaKnown RBP17.77■□□□□ 0.44
HMGCL-209ENST00000513148 PCDHGC5Q9Y5F6 944 aa17.77■□□□□ 0.44
HMGCL-209ENST00000513148 V9GYY5 206 aaPredicted RBP17.77■□□□□ 0.44
HMGCL-209ENST00000513148 LRRIQ3A6PVS8 624 aaPredicted RBP17.77■□□□□ 0.43
HMGCL-209ENST00000513148 I3L4J1 428 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 ITGB3P05106 788 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 KRT19P08727 400 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 TPM4P67936 248 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 NAA30Q147X3 362 aaPredicted RBP17.77■□□□□ 0.43
HMGCL-209ENST00000513148 STX1AQ16623 288 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 FUT10Q6P4F1 479 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 NT5DC4Q86YG4 428 aa17.77■□□□□ 0.43
HMGCL-209ENST00000513148 VPS52Q8N1B4 723 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms