RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 INTS13Q9NVM9 706 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 C2orf71A6NGG8 1288 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 CETN3O15182 167 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 TNNC2P02585 160 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 ITGB3P05106 788 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 KRT19P08727 400 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 POLR2BP30876 1174 aaKnown RBP18.81■□□□□ 0.6
DDR1-270ENST00000513043 LRRC63Q05C16 580 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 HYAL1Q12794 435 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 PAK1Q13153 545 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 USP41Q3LFD5 358 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 RTP2Q5QGT7 225 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 PDE12Q6L8Q7 609 aaKnown RBP18.81■□□□□ 0.6
DDR1-270ENST00000513043 WDR49Q8IV35 697 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 FAM186BQ8IYM0 893 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 CSGALNACT2Q8N6G5 542 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 MRPL43Q8N983 215 aaKnown RBP18.81■□□□□ 0.6
DDR1-270ENST00000513043 C1orf127Q8N9H9 656 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 TMEM174Q8WUU8 243 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 RIN2Q8WYP3 895 aaPredicted RBP18.81■□□□□ 0.6
DDR1-270ENST00000513043 MRPL17Q9NRX2 175 aaKnown RBP18.81■□□□□ 0.6
DDR1-270ENST00000513043 AGAP1Q9UPQ3 857 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.81■□□□□ 0.6
DDR1-270ENST00000513043 TRANK1O15050 2925 aa18.81■□□□□ 0.6
DDR1-270ENST00000513043 ANO9A1A5B4 782 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 LRRIQ3A6PVS8 624 aaPredicted RBP18.8■□□□□ 0.6
DDR1-270ENST00000513043 PIRO00625 290 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 TRAPPC3O43617 180 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 TKTP29401 623 aaKnown RBP18.8■□□□□ 0.6
DDR1-270ENST00000513043 PSMC2P35998 433 aaKnown RBP18.8■□□□□ 0.6
DDR1-270ENST00000513043 DLG4P78352 724 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 ELAVL2Q12926 359 aaKnown RBP18.8■□□□□ 0.6
DDR1-270ENST00000513043 DUOXA2Q1HG44 320 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 DPCR1Q3MIW9 517 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 CCDC183Q5T5S1 534 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 CAVIN1Q6NZI2 390 aaKnown RBP18.8■□□□□ 0.6
DDR1-270ENST00000513043 PRSS55Q6UWB4 352 aaPredicted RBP18.8■□□□□ 0.6
DDR1-270ENST00000513043 EP400NLQ6ZTU2 488 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 PARD3BQ8TEW8 1205 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 PPP2R3CQ969Q6 453 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 DUSP9Q99956 384 aaKnown RBP18.8■□□□□ 0.6
DDR1-270ENST00000513043 TTPALQ9BTX7 342 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 CHST7Q9NS84 486 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 TMEM63CQ9P1W3 806 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 STK39Q9UEW8 545 aa18.8■□□□□ 0.6
DDR1-270ENST00000513043 SPTLC1O15269 473 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 RPL17P18621 184 aaKnown RBP18.79■□□□□ 0.6
DDR1-270ENST00000513043 NLRP12P59046 1061 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 FKBP3Q00688 224 aaKnown RBP18.79■□□□□ 0.6
DDR1-270ENST00000513043 DSG1Q02413 1049 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 KIAA0319Q5VV43 1072 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 TTI2Q6NXR4 508 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 DSTYKQ6XUX3 929 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.79■□□□□ 0.6
DDR1-270ENST00000513043 GLYCTKQ8IVS8 523 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 ZNF516Q92618 1163 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 SUSD3Q96L08 255 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 PRDM6Q9NQX0 595 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 SIX4Q9UIU6 781 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 ITGA11Q9UKX5 1188 aa18.79■□□□□ 0.6
DDR1-270ENST00000513043 BICDL2A1A5D9 508 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 LINC01565O15544 149 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 CNPP09543 421 aaKnown RBP18.78■□□□□ 0.6
DDR1-270ENST00000513043 TRIM49P0CI25 452 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 TRIM49CP0CI26 452 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 EPB41P11171 864 aaKnown RBP18.78■□□□□ 0.6
DDR1-270ENST00000513043 KRT13P13646 458 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 FGFR3P22607 806 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 VAMP7P51809 220 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 LILRA4P59901 499 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 RBM10P98175 930 aaKnown RBP18.78■□□□□ 0.6
DDR1-270ENST00000513043 BFSP1Q12934 665 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 DUSP6Q16828 381 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 LLGL2Q6P1M3 1020 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 RBM43Q6ZSC3 357 aaKnown RBP18.78■□□□□ 0.6
DDR1-270ENST00000513043 TRAPPC11Q7Z392 1133 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 MLKLQ8NB16 471 aa18.78■□□□□ 0.6
DDR1-270ENST00000513043 TIMM13Q9Y5L4 95 aaPredicted RBP18.78■□□□□ 0.6
DDR1-270ENST00000513043 MAPK13O15264 365 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 LILRB3O75022 631 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 TAF6P49848 677 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 RBP5P82980 135 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 BIRC3Q13489 604 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 PSMD5Q16401 504 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 INTS8Q75QN2 995 aaKnown RBP18.77■□□□□ 0.6
DDR1-270ENST00000513043 ZC3H3Q8IXZ2 948 aaKnown RBP18.77■□□□□ 0.6
DDR1-270ENST00000513043 CXorf38Q8TB03 319 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 TMC2Q8TDI7 906 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 SENP8Q96LD8 212 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 ZNF560Q96MR9 790 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 KLHL5Q96PQ7 755 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 EMILIN2Q9BXX0 1053 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 MMRN2Q9H8L6 949 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 CLDND1Q9NY35 253 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 SSX2IPQ9Y2D8 614 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 R3HCC1Q9Y3T6 440 aaKnown RBP18.77■□□□□ 0.6
DDR1-270ENST00000513043 IRAK3Q9Y616 596 aa18.77■□□□□ 0.6
DDR1-270ENST00000513043 REV3LO60673 3130 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 TEX28O15482 410 aa18.76■□□□□ 0.59
DDR1-270ENST00000513043 CLASP2O75122 1294 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms