RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 NRSN2Q9GZP1 204 aa6.82□□□□□ -1.32
CHD1-208ENST00000512392 SENP6Q9GZR1 1112 aaPredicted RBP6.82□□□□□ -1.32
CHD1-208ENST00000512392 DNAI2Q9GZS0 605 aa6.82□□□□□ -1.32
CHD1-208ENST00000512392 USP44Q9H0E7 712 aa6.82□□□□□ -1.32
CHD1-208ENST00000512392 NKX2-4Q9H2Z4 354 aa6.82□□□□□ -1.32
CHD1-208ENST00000512392 RWDD1Q9H446 243 aaPredicted RBP6.82□□□□□ -1.32
CHD1-208ENST00000512392 CPNE7Q9UBL6 633 aa6.82□□□□□ -1.32
CHD1-208ENST00000512392 RGSL1A5PLK6 1076 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 CCDC154A6NI56 674 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 DDX39AO00148 427 aaKnown RBP6.81□□□□□ -1.32
CHD1-208ENST00000512392 AP3B1O00203 1094 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 TMEM63AO94886 807 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 ABCD3P28288 659 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 CIITAP33076 1130 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 LSP1P33241 339 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 CHRNA4P43681 627 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 PSMC6P62333 389 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 CHRNDQ07001 517 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 SLC12A1Q13621 1099 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 LASP1Q14847 261 aaKnown RBP6.81□□□□□ -1.32
CHD1-208ENST00000512392 LRCH2Q5VUJ6 765 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 CNKSR3Q6P9H4 555 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 SZRD1Q7Z422 152 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 ZNF610Q8N9Z0 462 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 AFG1LQ8WV93 481 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 AUTS2Q8WXX7 1259 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 VPS39Q96JC1 886 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 AGAP3Q96P47 875 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 USP26Q9BXU7 913 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 EMILIN2Q9BXX0 1053 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 ANKRD2Q9GZV1 360 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 WHRNQ9P202 907 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 DNAJB9Q9UBS3 223 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 MAN2B2Q9Y2E5 1009 aa6.81□□□□□ -1.32
CHD1-208ENST00000512392 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.81□□□□□ -1.32
CHD1-208ENST00000512392 HMX3A6NHT5 357 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 F8W735 103 aaPredicted RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 CAMTA2O94983 1202 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 MAP2K6P52564 334 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 PNLIPRP1P54315 467 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 PRKAA2P54646 552 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 TGFB2P61812 414 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 HTRA4P83105 476 aaPredicted RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 POU4F3Q15319 338 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 CT83Q5H943 113 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 BMP2KLQ5H9B9 411 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 CCDC183Q5T5S1 534 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 FYB2Q5VWT5 728 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 MCTP1Q6DN14 999 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 GPR149Q86SP6 731 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 TTC7BQ86TV6 843 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 ZBTB8BQ8NAP8 495 aaPredicted RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 ATP11CQ8NB49 1132 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 LINS1Q8NG48 757 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 USP6NLQ92738 828 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 GBP3Q9H0R5 595 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 THAP9Q9H5L6 903 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 RXFP3Q9NSD7 469 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 RBM28Q9NW13 759 aaKnown RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 OGDHLQ9ULD0 1010 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 SPO11Q9Y5K1 396 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 SQORQ9Y6N5 450 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 LOC100289279A0A1B0GTE1 492 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 MEGF11A6BM72 1044 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 H0YC42 278 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 H3BNC9 293 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 SH2B2O14492 632 aaPredicted RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 HTRA2O43464 458 aaPredicted RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 ZBTB14O43829 449 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 WISP1O95388 367 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 SCG5P05408 212 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 MMEP08473 750 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 PDHA1P08559 390 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 SNRPA1P09661 255 aaKnown RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 CLEC2LP0C7M8 214 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 ACADMP11310 421 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 FGFR2P21802 821 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 PTX3P26022 381 aaPredicted RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 GRK4P32298 578 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 NNMTP40261 264 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 VAMP2P63027 116 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 TBCCQ15814 346 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 CNGA2Q16280 664 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 FSTL4Q6MZW2 842 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 ACAD11Q709F0 780 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 GLRX5Q86SX6 157 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 LURAP1LQ8IV03 231 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 PHACTR4Q8IZ21 702 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 TTC39CQ8N584 583 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 TMCO5AQ8N6Q1 288 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 MARCH10Q8NA82 808 aaPredicted RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 DRAXINQ8NBI3 349 aaPredicted RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 UBASH3BQ8TF42 649 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 WFDC12Q8WWY7 111 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 EAF2Q96CJ1 260 aaPredicted RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 CCDC43Q96MW1 224 aaKnown RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 ZNF396Q96N95 335 aaPredicted RBP6.8□□□□□ -1.32
CHD1-208ENST00000512392 ZCWPW1Q9H0M4 648 aa6.8□□□□□ -1.32
CHD1-208ENST00000512392 AKTIPQ9H8T0 292 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms