RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 MRPL47Q9HD33 250 aaKnown RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 OLA1Q9NTK5 396 aaKnown RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 ADAM22Q9P0K1 906 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 SLC13A4Q9UKG4 626 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 A0A1W2PQJ5 194 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 CCDC188H7C350 402 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 ATP5HO75947 161 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 KRT1P04264 644 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 SREBF1P36956 1147 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 GALCP54803 685 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 PPHLN1Q8NEY8 458 aaKnown RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 TMEM143Q96AN5 459 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 ZFP69BQ9UJL9 534 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 SETD1AO15047 1707 aaKnown RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 EFCAB14O75071 495 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 LRRC36Q1X8D7 754 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 COG1Q8WTW3 980 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 ZKSCAN4Q969J2 545 aaPredicted RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 BBS2Q9BXC9 721 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 ARHGEF3Q9NR81 526 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 DLGAP2Q9P1A6 1054 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 NOC2LQ9Y3T9 749 aaKnown RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 GOLGA8CPA6NN73 597 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 M0R3G1 203 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 SLC16A3O15427 465 aaKnown RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 OCM2P0CE71 109 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 OCMP0CE72 109 aaPredicted RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 PUDPQ08623 228 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 DACT2Q5SW24 774 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 SLC51AQ86UW1 340 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 C7orf31Q8N865 590 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 SCFD1Q8WVM8 642 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 SLC10A4Q96EP9 437 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 PRPF18Q99633 342 aaKnown RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 DUSP9Q99956 384 aaKnown RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 NUP85Q9BW27 656 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 APEX2Q9UBZ4 518 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 AMACRQ9UHK6 382 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 M0QZ92 97 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 PRAMEP78395 509 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 MAP3K10Q02779 954 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 GIT2Q14161 759 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 R3HDM1Q15032 1099 aaKnown RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 MAPK6Q16659 721 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 B4GALNT2Q8NHY0 566 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 TEKT4Q8WW24 435 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 GMCL1Q96IK5 515 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 FAM49AQ9H0Q0 323 aaPredicted RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 ECT2Q9H8V3 914 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 BLOC1S4Q9NUP1 217 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 GAKO14976 1311 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 LINC00854A0A1B0GVQ3 168 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 GOLGA8MH3BSY2 632 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 TM4SF1P30408 202 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 ACOT2P49753 483 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 EIF2B2P49770 351 aaKnown RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 TBX2Q13207 712 aaPredicted RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 TEDDM1Q5T9Z0 273 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 STX19Q8N4C7 294 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 ZNF564Q8TBZ8 553 aaPredicted RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 RFFLQ8WZ73 363 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 MTERF3Q96E29 417 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 TEX13BQ9BXU2 312 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 MBD2Q9UBB5 411 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 FBXO40Q9UH90 709 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 RGPD1P0DJD0 1748 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 A0A087X0T9 212 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 SYNDIG1LA6NDD5 238 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 LRRIQ3A6PVS8 624 aaPredicted RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 FAM228BP0C875 321 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 HABP4Q5JVS0 413 aaKnown RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 KLHDC7AQ5VTJ3 777 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 RHPN2Q8IUC4 686 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 DTX3LQ8TDB6 740 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 PHF21AQ96BD5 680 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 FAM81BQ96LP2 452 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 CALN1Q9BXU9 219 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 GGA3Q9NZ52 723 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 CHORDC1Q9UHD1 332 aaPredicted RBP11.41□□□□□ -0.58
CPNE4-209ENST00000512055 ANAPC5Q9UJX4 755 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 FBXL5Q9UKA1 691 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 SPATA2Q9UM82 520 aa11.41□□□□□ -0.58
CPNE4-209ENST00000512055 FAM86B1E9PN63 330 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 DNALI1O14645 258 aaPredicted RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 TFRCP02786 760 aaKnown RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 FAM86B2P0C5J1 330 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 MRPS35P82673 323 aaKnown RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 RARS2Q5T160 578 aaKnown RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 SPOPLQ6IQ16 392 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 TRIM65Q6PJ69 517 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 SPDYE1Q8NFV5 336 aaPredicted RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 RIT2Q99578 217 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 AGPAT1Q99943 283 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 STK33Q9BYT3 514 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 RPF1Q9H9Y2 349 aaKnown RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 GPRC5CQ9NQ84 441 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms