RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 AXIN1O15169 862 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 GDF9O60383 454 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 SEC24AO95486 1093 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 CHRNB1P11230 501 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 TDGF1P13385 188 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 FCARP24071 287 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 IGFBP6P24592 240 aaPredicted RBP11.35□□□□□ -0.59
MBD4-208ENST00000509828 MCM4P33991 863 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 MCM7P33993 719 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 DGKKQ5KSL6 1271 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 ZNF280DQ6N043 979 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 CATSPER3Q86XQ3 398 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 MAP4K3Q8IVH8 894 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 MFSD6LQ8IWD5 586 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 TTC8Q8TAM2 541 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 BSNDQ8WZ55 320 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 MSANTD3Q96H12 275 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 ACAP3Q96P50 834 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 KIFC3Q9BVG8 833 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 RBM12Q9NTZ6 932 aaKnown RBP11.35□□□□□ -0.59
MBD4-208ENST00000509828 FBXL5Q9UKA1 691 aa11.35□□□□□ -0.59
MBD4-208ENST00000509828 PFKFB2O60825 505 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 MED24O75448 989 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 SPATA31C1P0DKV0 1188 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 HARSP12081 509 aaKnown RBP11.34□□□□□ -0.59
MBD4-208ENST00000509828 RPL9P32969 192 aaKnown RBP11.34□□□□□ -0.59
MBD4-208ENST00000509828 CCR2P41597 374 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 EPHB3P54753 998 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 PLD1Q13393 1074 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 SAFBQ15424 915 aaKnown RBP eCLIP11.34□□□□□ -0.59
MBD4-208ENST00000509828 TEAD2Q15562 447 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 ZNF568Q3ZCX4 644 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 NT5DC1Q5TFE4 455 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 GPIHBP1Q8IV16 184 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 FAM160A2Q8N612 972 aaPredicted RBP11.34□□□□□ -0.59
MBD4-208ENST00000509828 C3orf58Q8NDZ4 430 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 KIFAP3Q92845 792 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 CCDC113Q9H0I3 377 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 AFF4Q9UHB7 1163 aaKnown RBP11.34□□□□□ -0.59
MBD4-208ENST00000509828 MAFFQ9ULX9 164 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 TNFSF13BQ9Y275 285 aa11.34□□□□□ -0.59
MBD4-208ENST00000509828 SHISA7A6NL88 538 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 BTBD18B2RXH4 712 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 CHADO15335 359 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 CCDC192P0DO97 292 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 GRM5P41594 1212 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 MATR3P43243 847 aaKnown RBP eCLIP11.33□□□□□ -0.6
MBD4-208ENST00000509828 ALDH1A3P47895 512 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 SOX9P48436 509 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 SOX4Q06945 474 aaPredicted RBP11.33□□□□□ -0.6
MBD4-208ENST00000509828 PTGDRQ13258 359 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 ANKRD1Q15327 319 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 N4BP2L1Q5TBK1 243 aaPredicted RBP11.33□□□□□ -0.6
MBD4-208ENST00000509828 POTEHQ6S545 545 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 CD300LGQ6UXG3 332 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 USP37Q86T82 979 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 DIS3L2Q8IYB7 885 aaKnown RBP11.33□□□□□ -0.6
MBD4-208ENST00000509828 ZNF687Q8N1G0 1237 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 MTMR9Q96QG7 549 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 POLR3CQ9BUI4 534 aaPredicted RBP11.33□□□□□ -0.6
MBD4-208ENST00000509828 MRPL4Q9BYD3 311 aaKnown RBP11.33□□□□□ -0.6
MBD4-208ENST00000509828 ARRDC1-AS1Q9H2J1 176 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 CEP72Q9P209 647 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 DOCK6Q96HP0 2047 aa11.33□□□□□ -0.6
MBD4-208ENST00000509828 A0A1W2PRU2 124 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 SPECC1L-ADORA2AF8WAN1 911 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 CCT6AP40227 531 aaKnown RBP11.32□□□□□ -0.6
MBD4-208ENST00000509828 MLLT6P55198 1093 aaPredicted RBP11.32□□□□□ -0.6
MBD4-208ENST00000509828 PON2Q15165 354 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 PTPAQ15257 358 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 SF3A2Q15428 464 aaKnown RBP11.32□□□□□ -0.6
MBD4-208ENST00000509828 CCDC6Q16204 474 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 TAF12Q16514 161 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 ARHGAP15Q53QZ3 475 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 HAUS3Q68CZ6 603 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 RNF19BQ6ZMZ0 732 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 CACNA2D4Q7Z3S7 1137 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 RALGPS2Q86X27 583 aaPredicted RBP11.32□□□□□ -0.6
MBD4-208ENST00000509828 CEP120Q8N960 986 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 DDX12PQ92771 950 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 TBC1D32Q96NH3 1257 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 BHMT2Q9H2M3 363 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 ATXN3LQ9H3M9 355 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 TRPV4Q9HBA0 871 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 THG1LQ9NWX6 298 aaKnown RBP11.32□□□□□ -0.6
MBD4-208ENST00000509828 TPCN1Q9ULQ1 816 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 SLC8A2Q9UPR5 921 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 PATJQ8NI35 1801 aa11.32□□□□□ -0.6
MBD4-208ENST00000509828 KMT2BQ9UMN6 2715 aaPredicted RBP11.31□□□□□ -0.6
MBD4-208ENST00000509828 EPB41L2O43491 1005 aaKnown RBP11.31□□□□□ -0.6
MBD4-208ENST00000509828 RPP40O75818 363 aaKnown RBP11.31□□□□□ -0.6
MBD4-208ENST00000509828 FGF19O95750 216 aa11.31□□□□□ -0.6
MBD4-208ENST00000509828 EDN1P05305 212 aa11.31□□□□□ -0.6
MBD4-208ENST00000509828 MCF2P10911 925 aa11.31□□□□□ -0.6
MBD4-208ENST00000509828 RPA1P27694 616 aa11.31□□□□□ -0.6
MBD4-208ENST00000509828 PEX3P56589 373 aa11.31□□□□□ -0.6
MBD4-208ENST00000509828 YWHAHQ04917 246 aaPredicted RBP11.31□□□□□ -0.6
MBD4-208ENST00000509828 STRN3Q13033 797 aa11.31□□□□□ -0.6
MBD4-208ENST00000509828 GNL2Q13823 731 aaKnown RBP11.31□□□□□ -0.6
MBD4-208ENST00000509828 MRPL58Q14197 206 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms