RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-222ENST00000509774 ZNF668Q96K58 619 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-222ENST00000509774 GTPBP4Q9BZE4 634 aaKnown RBP11.25□□□□□ -0.61
PTPN20-222ENST00000509774 CCDC113Q9H0I3 377 aa11.25□□□□□ -0.61
PTPN20-222ENST00000509774 PANK4Q9NVE7 773 aa11.25□□□□□ -0.61
PTPN20-222ENST00000509774 WNT16Q9UBV4 365 aa11.25□□□□□ -0.61
PTPN20-222ENST00000509774 SERTAD1Q9UHV2 236 aa11.25□□□□□ -0.61
PTPN20-222ENST00000509774 PCDHB7Q9Y5E2 793 aa11.25□□□□□ -0.61
PTPN20-222ENST00000509774 PCDHB12Q9Y5F1 795 aa11.25□□□□□ -0.61
PTPN20-222ENST00000509774 HCFC2Q9Y5Z7 792 aa11.25□□□□□ -0.61
PTPN20-222ENST00000509774 HELZ2Q9BYK8 2649 aaKnown RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 NPHP3-ACAD11A0A0J9YXS1 232 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 N4BP3O15049 544 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 TSPAN1O60635 241 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 CSDE1O75534 798 aaKnown RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 PRKCBP05771 671 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 IDEP14735 1019 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 GLULP15104 373 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 PRPF4BQ13523 1007 aaKnown RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 SNW1Q13573 536 aaKnown RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 RARS2Q5T160 578 aaKnown RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 TWF2Q6IBS0 349 aaKnown RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 KRBA2Q6ZNG9 492 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 STXBP4Q6ZWJ1 553 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 UNC13DQ70J99 1090 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 HAUS6Q7Z4H7 955 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 MRPL10Q7Z7H8 261 aaKnown RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 HACE1Q8IYU2 909 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 C12orf76Q8N812 135 aaPredicted RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 CCDC47Q96A33 483 aaKnown RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 PGBD4Q96DM1 585 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 TCF25Q9BQ70 676 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 ADPGKQ9BRR6 497 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 KCNK12Q9HB15 430 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 POLD4Q9HCU8 107 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 UBN1Q9NPG3 1134 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 TMEM161AQ9NX61 479 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 ZMIZ1Q9ULJ6 1067 aa11.24□□□□□ -0.61
PTPN20-222ENST00000509774 SMG5Q9UPR3 1016 aaKnown RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 PIN4Q9Y237 131 aaKnown RBP11.24□□□□□ -0.61
PTPN20-222ENST00000509774 CARNS1A5YM72 827 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 SLC16A4O15374 487 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 MGEA5O60502 916 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 PRPF40AO75400 957 aaKnown RBP11.23□□□□□ -0.61
PTPN20-222ENST00000509774 ARF4P18085 180 aaPredicted RBP11.23□□□□□ -0.61
PTPN20-222ENST00000509774 SLC27A1Q6PCB7 646 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 ZPBP2Q6X784 338 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 THNSL1Q8IYQ7 743 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 NETO1Q8TDF5 533 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 SECISBP2LQ93073 1101 aaKnown RBP11.23□□□□□ -0.61
PTPN20-222ENST00000509774 FIZ1Q96SL8 496 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 STRA6Q9BX79 667 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 MRPL4Q9BYD3 311 aaKnown RBP11.23□□□□□ -0.61
PTPN20-222ENST00000509774 GOLPH3LQ9H4A5 285 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 ENTPD7Q9NQZ7 604 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 FAM105AQ9NUU6 356 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 CA14Q9ULX7 337 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 TBX20Q9UMR3 447 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 EXOC7Q9UPT5 735 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 TNFSF13BQ9Y275 285 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.23□□□□□ -0.61
PTPN20-222ENST00000509774 CNTNAP2Q9UHC6 1331 aa11.23□□□□□ -0.61
PTPN20-222ENST00000509774 GPR37O15354 613 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 GDF9O60383 454 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 TOM1L1O75674 476 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 PIGRP01833 764 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 FGFR4P22455 802 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 RFX1P22670 979 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 AFMP43652 599 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 SNRPFP62306 86 aaKnown RBP11.22□□□□□ -0.61
PTPN20-222ENST00000509774 ASIC1P78348 528 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 COL4A3Q01955 1670 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 EHHADHQ08426 723 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 KYAT1Q16773 422 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 ZNF528Q3MIS6 628 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 ATAT1Q5SQI0 421 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 SPOUT1Q5T280 376 aaKnown RBP11.22□□□□□ -0.61
PTPN20-222ENST00000509774 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 ECHDC2Q86YB7 292 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 COLGALT1Q8NBJ5 622 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 STAMQ92783 540 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 BORCS6Q96GS4 357 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 ACO2Q99798 780 aaKnown RBP11.22□□□□□ -0.61
PTPN20-222ENST00000509774 EPC1Q9H2F5 836 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 TMEM206Q9H813 350 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 MRPL44Q9H9J2 332 aaKnown RBP11.22□□□□□ -0.61
PTPN20-222ENST00000509774 LZTS1Q9Y250 596 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
PTPN20-222ENST00000509774 ZMYM2Q9UBW7 1377 aa11.21□□□□□ -0.61
PTPN20-222ENST00000509774 K7ENM7 598 aa11.21□□□□□ -0.61
PTPN20-222ENST00000509774 EIF3DO15371 548 aaKnown RBP eCLIP11.21□□□□□ -0.61
PTPN20-222ENST00000509774 KIF20AO95235 890 aa11.21□□□□□ -0.61
PTPN20-222ENST00000509774 SMC2O95347 1197 aa11.21□□□□□ -0.61
PTPN20-222ENST00000509774 POU5F1Q01860 360 aaKnown RBP11.21□□□□□ -0.61
PTPN20-222ENST00000509774 DPYDQ12882 1025 aa11.21□□□□□ -0.61
PTPN20-222ENST00000509774 CUL4BQ13620 913 aa11.21□□□□□ -0.61
PTPN20-222ENST00000509774 KCNB1Q14721 858 aa11.21□□□□□ -0.61
PTPN20-222ENST00000509774 POSTNQ15063 836 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms