RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 PRRG1O14668 218 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 CHADO15335 359 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 DGAT1O75907 488 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 APBB3O95704 486 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 CAPNS1P04632 268 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 CEBPBP17676 345 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 ENGP17813 658 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 HOXC13P31276 330 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 VIPR2P41587 438 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 DPP6P42658 865 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 AMPD2Q01433 879 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 GFPT1Q06210 699 aaPredicted RBP4.31□□□□□ -1.72
RNF4-211ENST00000509206 PSMD2Q13200 908 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 MCMDC2Q4G0Z9 681 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 FAM171A1Q5VUB5 890 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 VITQ6UXI7 678 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 ABHD15Q6UXT9 468 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.31□□□□□ -1.72
RNF4-211ENST00000509206 RTL10Q7L3V2 364 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 TAS1R3Q7RTX0 852 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 KRT25Q7Z3Z0 450 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 TTC30AQ86WT1 665 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 RHPN2Q8IUC4 686 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 MFSD6LQ8IWD5 586 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 COLGALT2Q8IYK4 626 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 ENAHQ8N8S7 591 aaPredicted RBP4.31□□□□□ -1.72
RNF4-211ENST00000509206 PNPLA1Q8N8W4 532 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 FAM181AQ8N9Y4 354 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 TSEN2Q8NCE0 465 aaKnown RBP4.31□□□□□ -1.72
RNF4-211ENST00000509206 SNIP1Q8TAD8 396 aaKnown RBP4.31□□□□□ -1.72
RNF4-211ENST00000509206 ADAMTS14Q8WXS8 1223 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 EXOC4Q96A65 974 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 MRGPRX2Q96LB1 330 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 ZNF512Q96ME7 567 aaPredicted RBP4.31□□□□□ -1.72
RNF4-211ENST00000509206 MBOAT7Q96N66 472 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 FCRL3Q96P31 734 aaPredicted RBP4.31□□□□□ -1.72
RNF4-211ENST00000509206 HHIPQ96QV1 700 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 GAD1Q99259 594 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 FDXACB1Q9BRP7 624 aaPredicted RBP4.31□□□□□ -1.72
RNF4-211ENST00000509206 TTPALQ9BTX7 342 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 GPR62Q9BZJ7 368 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 TRIM6Q9C030 488 aaPredicted RBP4.31□□□□□ -1.72
RNF4-211ENST00000509206 GPR88Q9GZN0 384 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 RIOX1Q9H6W3 641 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 CYLDQ9NQC7 956 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 TMPRSS4Q9NRS4 437 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 C2orf42Q9NWW7 574 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 MARCH5Q9NX47 278 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 ZSWIM5Q9P217 1185 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 GABBR1Q9UBS5 961 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 MAD2L2Q9UI95 211 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 ADAM28Q9UKQ2 775 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 PCDHA6Q9UN73 950 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 PCDHA8Q9Y5H6 950 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 ITPR1Q14643 2758 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 LOC400499M0QZD8 3231 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 NEDD4P46934 1319 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 A0A087WV48 116 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 IGKV6D-21A0A0A0MT36 114 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 TEX51A0A1B0GUA7 166 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 WDR27A2RRH5 827 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 MYBPHLA2RUH7 354 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 TRABD2BA6NFA1 517 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 ARL5CA6NH57 179 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 UPK3BL1B0FP48 263 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 TMEM229AB2RXF0 380 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 UPK3BL2E5RIL1 263 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 MEIS2O14770 477 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 SLC28A2O43868 658 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 B4GALT3O60512 393 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 ADH1CP00326 375 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 ABL1P00519 1130 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 POU2F2P09086 479 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 FTH1P19P0C7X4 201 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 RLBP1P12271 317 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 MYL4P12829 197 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 WEE1P30291 646 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 OR1D2P34982 312 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 GRM5P41594 1212 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 SCNN1GP51170 649 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 AFF1P51825 1210 aaKnown RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 GDF10P55107 478 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 ARPP19P56211 112 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 FAM193AP78312 1265 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 SRSF1Q07955 248 aaKnown RBP eCLIP4.3□□□□□ -1.724e-6■□□□□ 8.1
RNF4-211ENST00000509206 SPIRE1Q08AE8 756 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 ELAVL2Q12926 359 aaKnown RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 TRDNQ13061 729 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 SEMA3BQ13214 749 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 GRM4Q14833 912 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 UBE2SQ16763 222 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 SLC5A9Q2M3M2 681 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 CEP55Q53EZ4 464 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 RTP2Q5QGT7 225 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 PMS2CLQ68D20 193 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 LMBRD2Q68DH5 695 aaPredicted RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 ARMCX6Q7L4S7 300 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 LPCAT2Q7L5N7 544 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 GPR155Q7Z3F1 870 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 CATIPQ7Z7H3 387 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms