RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PARP2Q9UGN5 583 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 CPSF3Q9UKF6 684 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 CFAP45Q9UL16 551 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 BARX2Q9UMQ3 279 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 RWDD3Q9Y3V2 267 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 SCN1AP35498 2009 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 C2orf16Q68DN1 1984 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 LOC100996750A0A140TA64 210 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 C2orf71A6NGG8 1288 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 H3BQ06 376 aaPredicted RBP7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 TNFRSF10AO00220 468 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 GCNT3O95395 438 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 CTSAP10619 480 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 SKIP12755 728 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 BRCC3P46736 316 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 CLCNKBP51801 687 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 TUSC3Q13454 348 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 PNOCQ13519 176 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 ZBTB6Q15916 424 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 DUSP6Q16828 381 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 HERC4Q5GLZ8 1057 aaPredicted RBP7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 FAM26FQ5R3K3 315 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 SPOUT1Q5T280 376 aaKnown RBP7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 KANK3Q6NY19 840 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 FUT10Q6P4F1 479 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 KRBA2Q6ZNG9 492 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 IQUBQ8NA54 791 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 CNNM3Q8NE01 707 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 URGCPQ8TCY9 931 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 HVCN1Q96D96 273 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 MSLNLQ96KJ4 702 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 TCF25Q9BQ70 676 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 KRTAP4-6Q9BYQ5 205 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 TOPORSQ9NS56 1045 aaPredicted RBP7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 FAM13BQ9NYF5 915 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 SPG21Q9NZD8 308 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 THEGQ9P2T0 379 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 SEL1LQ9UBV2 794 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 FKBPLQ9UIM3 349 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 ZMIZ1Q9ULJ6 1067 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 LZTS1Q9Y250 596 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 RBM19Q9Y4C8 960 aaKnown RBP7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 BDP1A6H8Y1 2624 aa7.86□□□□□ -1.15
TOPBP1-207ENST00000509162 GOLGA8IPA6NC78 632 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 GOLGA8JA6NMD2 632 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 LACTBL1A8MY62 500 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 OGTO15294 1046 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 CLASP2O75122 1294 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 DXOO77932 396 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 VNN2O95498 520 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 IL9P15248 144 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 EPCAMP16422 314 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 RPL17P18621 184 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 BMP6P22004 513 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 PPM1AP35813 382 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 SYKP43405 635 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 OR1G1P47890 313 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 NRIP1P48552 1158 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 ACOT2P49753 483 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 LIG4P49917 911 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 UBE3AQ05086 875 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 STRN3Q13033 797 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 HSP90AA2PQ14568 343 aaPredicted RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 CLUL1Q15846 466 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 UPP1Q16831 310 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 CCDC142Q17RM4 750 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 ZCWPW2Q504Y3 356 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 KIAA0319Q5VV43 1072 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 JADE1Q6IE81 842 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 PRSS55Q6UWB4 352 aaPredicted RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 DDX53Q86TM3 631 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 RBM23Q86U06 439 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 CBWD2Q8IUF1 395 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 BRSK2Q8IWQ3 736 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 NELFCDQ8IXH7 590 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 SMYD4Q8IYR2 804 aaPredicted RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 VPS52Q8N1B4 723 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 ZNF507Q8TCN5 953 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 SLC22A17Q8WUG5 538 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 PABPC5Q96DU9 382 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 SCAND2PQ9GZW5 306 aaPredicted RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 KCTD10Q9H3F6 313 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 MRPL44Q9H9J2 332 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 MAGEF1Q9HAY2 307 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 SLC39A2Q9NP94 309 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 CD320Q9NPF0 282 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 AGPAT3Q9NRZ7 376 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 CHST7Q9NS84 486 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 PCDHB12Q9Y5F1 795 aa7.85□□□□□ -1.15
TOPBP1-207ENST00000509162 TCF20Q9UGU0 1960 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 UBE4BO95155 1302 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 FAM187AA6NFU0 413 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 TMEM189-UBE2V1I3L0A0 370 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 PODXLO00592 558 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 EIF3DO15371 548 aaKnown RBP eCLIP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 TEX28O15482 410 aa7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 ZBTB24O43167 697 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-207ENST00000509162 ZNF202O95125 648 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms