RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 SLC35G2Q8TBE7 412 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 PYROXD1Q8WU10 500 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 SREK1Q8WXA9 508 aaKnown RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 IP6K1Q92551 441 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 MAML1Q92585 1016 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 ZNF75CPQ92670 426 aaPredicted RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 ZNF512BQ96KM6 892 aaPredicted RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 BIRC8Q96P09 236 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 CRNKL1Q9BZJ0 848 aaKnown RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 NINJ2Q9NZG7 142 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 SCHIP1Q9P0W5 487 aaPredicted RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 TRIM17Q9Y577 477 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 BAZ2BQ9UIF8 2168 aaKnown RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 FUOMA2VDF0 154 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 GSG1L2A8MUP6 293 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 GOLGA8TH3BQL2 631 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 TM7SF2O76062 418 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 GOLGA8HP0CJ92 632 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 HOXD11P31277 338 aaPredicted RBP10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 TGFBIQ15582 683 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 RSPH3Q86UC2 560 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 DZIP1Q86YF9 867 aaKnown RBP10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 CCDC105Q8IYK2 499 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 MARVELD2Q8N4S9 558 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 PLBD2Q8NHP8 589 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 RFWD2Q8NHY2 731 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 DDI1Q8WTU0 396 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 HEPHQ9BQS7 1158 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 GRIP2Q9C0E4 1043 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 TPK1Q9H3S4 243 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 UVRAGQ9P2Y5 699 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 GIT1Q9Y2X7 761 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 COQ6Q9Y2Z9 468 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 AK5Q9Y6K8 562 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 FAM205AQ6ZU69 1335 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 TRAF5O00463 557 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 TP73O15350 636 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 TMEM253P0C7T8 217 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 BCAP31P51572 246 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 CDK16Q00536 496 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 PFKFB3Q16875 520 aaPredicted RBP10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 PCNX4Q63HM2 1172 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 FBXL19Q6PCT2 694 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 SV2BQ7L1I2 683 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 C17orf75Q9HAS0 396 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 S100A14Q9HCY8 104 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 ARHGEF4Q9NR80 690 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 DNAJC17Q9NVM6 304 aaKnown RBP10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 DCTN4Q9UJW0 460 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 LZTS1Q9Y250 596 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 PTPN22Q9Y2R2 807 aa10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 MTO1Q9Y2Z2 717 aaKnown RBP10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 CTDP1Q9Y5B0 961 aaPredicted RBP10.59□□□□□ -0.71
PDGFRA-207ENST00000509092 PCDH11YQ9BZA8 1340 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 MYMKA6NI61 221 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 MIF4GDA9UHW6 222 aaKnown RBP10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 SPECC1L-ADORA2AF8WAN1 911 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 TXNDC9O14530 226 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 ITIH2P19823 946 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 ZBTB16Q05516 673 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 UBE4AQ14139 1066 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 KRT81Q14533 505 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 DPY19L2P1Q6NXN4 242 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 AADACL2Q6P093 401 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 ZNF790Q6PG37 636 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 ZNF410Q86VK4 478 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 ULK2Q8IYT8 1036 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 ZDHHC14Q8IZN3 488 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 ALLCQ8N6M5 410 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 ENAHQ8N8S7 591 aaPredicted RBP10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 STARD8Q92502 1023 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 NACAP1Q9BZK3 213 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 CCPG1Q9ULG6 757 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 NEU2Q9Y3R4 380 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 LAMB1P07942 1786 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 COL18A1P39060 1754 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 DDAH1O94760 285 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 CSF1RP07333 972 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 UCHL3P15374 230 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 STIP1P31948 543 aaKnown RBP10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 TCF7P36402 384 aaPredicted RBP10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 CCT8P50990 548 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 CYP4A11Q02928 519 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 FOLH1Q04609 750 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 CHRNA2Q15822 529 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 C1orf146Q5VVC0 180 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 KYAT3Q6YP21 454 aaKnown RBP10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 UBL4BQ8N7F7 174 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 C12orf50Q8NA57 414 aaPredicted RBP10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 BHMTQ93088 406 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 CLIP3Q96DZ5 547 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 PRR11Q96HE9 360 aaPredicted RBP10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 OSBPL10Q9BXB5 764 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 MRPL1Q9BYD6 325 aaKnown RBP10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 TRIM55Q9BYV6 548 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 OSBPL6Q9BZF3 934 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 GBA3Q9H227 469 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 TRABDQ9H4I3 376 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms